Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu04g01075 atgcaagaaacgaaagaaaagaagaagaagaggaagaggaagaagaacgtgcaagaagaaGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAGGAGGAGGAAAAAGAACGTGCAGCAAGAAGAAGAAGAAGAAGGAGAAAGAGAAGGCAAGAAACGAAAGAAAAGAAGAAGAAGAAGAGGAAGAAGAAGAAGAAGAAGAAGAACGACAAAACATTCTACAAGTTTGTGCTAGAACTGCATAACCACCTTCAGATAAACAAGAAGACAAATATTATGAGTTCTTCTGGAGCCATGCAAAAAAAGCATGAGGAGAATAGTTTCCTTGATACCAAGACAATGGCGGAAGGTTCAGACCCATCACCATCACCAACAAACATGGTTGCAGCTGCAGATGAAGGAAACACCGAAAACAGCAATGAAGAGAATCTCAATCTCTCTTTGGATGAGTTCTATCACCAAAACCACAATCCACCACCACAAACAACAGAAGGTGTCTCAACCTTTGAGAATGGAACATCTTCGATATCTATGGACATAGAAAACACACAGAATCTGAGTTTGAACATCGGCAATTCCTACAGCAACAAGGGTACTACTACCCCCTTGGTGCAAGAGATTGTGATTGATCATGATGATGCATTTCACTATGAGAAATCCAATTGGGACTCTACCATTCATGAATTGCTTGATCTTGGATTTTCTAACCACAATGAAAATCAGCAAGCACATGATCACCAACAATTTCAGCTATGTGAGGCACAAAATTGTAGTCAAAGTTACCATTCATCAGATCTTCTTCAGCTTCATTTGAATCCGAATCAAATCCCTTGCATCACAAACCCAATTCAGAATAATACACCAAACTTTCAACATTCCATGGGGTTCCTTGGTGACCTTCCTGTGGGATCAGACTATGACACTTCACTTCATTTGAATCCAGCCTTTGGAGTTGGAGAGTTGTTTCCGTCTCTCCCGCATGGCTACACTAGGCTGACTGATTCGAGGAGCGGATTCCTCTTTGGTGGAGGGGATGAAATGGAGGGAAATGGAGCTTGTTATCAAGATGGAGATGGAAGCCAGGTTGACATTGGAGTGATGGAGTTCAACAGAGCCAGAGCTTGTTCTGTTGGTGGCAGAGGGAGGAGAGGACAGGGTACCATGCCAATTGATAAACAAAGAAGAGAGCAATTGAATGACAAATACCAAATCTTGAGAAGTTTGATCCCAAGCCCCACTAAGGTAGATAGAGCATCTGTGGTGGGAGATGCAATTGATTACATAAGAGAACTGATTAGAACAGTCAATGAGCTCAAGTCACTGGTGGAGAAGAAAAGGATTGGGAGGGAGAGGTTCAAGAGACACAAAGATGAAAATGATGCTTCAGAGAGCTGTAACATAAAACCTTATGGTGATGGGTCCATAAGAACCTCATGGCTTCAGAGGAAATCGAAAGACAGCGAGGTTGATGTCCGAATAATCGATGATGAAGTTATAATCAAGATGGTTCAGAGGAAGAAGATCAATTGCATGCTTTTTGTCCCCAAGGTCCTGGATGAACTTCAGTTGGATCTTCACCATGTTGCTGGTGGCCATGTTGGAGAATATTGCAGTTTCTTGTTCAATAGCAAGATAATTGAAGGTTCTTCAGTCTATGCAAGTGCCATTGCCAACAGGGTGATTGAGGTTATGGACACTCAGTATGCAGCAGCAGCTGTTCCACACAATAGCAGCTATTAG 1764 0.4059 MQETKEKKKKRKRKKNVQEEEEEEEEEEEEEEEEEEEEEEEEEKERAARRRRRRRKRRQETKEKKKKKRKKKKKKKNDKTFYKFVLELHNHLQINKKTNIMSSSGAMQKKHEENSFLDTKTMAEGSDPSPSPTNMVAAADEGNTENSNEENLNLSLDEFYHQNHNPPPQTTEGVSTFENGTSSISMDIENTQNLSLNIGNSYSNKGTTTPLVQEIVIDHDDAFHYEKSNWDSTIHELLDLGFSNHNENQQAHDHQQFQLCEAQNCSQSYHSSDLLQLHLNPNQIPCITNPIQNNTPNFQHSMGFLGDLPVGSDYDTSLHLNPAFGVGELFPSLPHGYTRLTDSRSGFLFGGGDEMEGNGACYQDGDGSQVDIGVMEFNRARACSVGGRGRRGQGTMPIDKQRREQLNDKYQILRSLIPSPTKVDRASVVGDAIDYIRELIRTVNELKSLVEKKRIGRERFKRHKDENDASESCNIKPYGDGSIRTSWLQRKSKDSEVDVRIIDDEVIIKMVQRKKINCMLFVPKVLDELQLDLHHVAGGHVGEYCSFLFNSKIIEGSSVYASAIANRVIEVMDTQYAAAAVPHNSSY 587
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu04g01075 587 Coils Coil 1 78 - -
Adu04g01075 587 MobiDBLite consensus disorder prediction 20 42 - -
Adu04g01075 587 PANTHER TRANSCRIPTION FACTOR BHLH91 113 581 - -
Adu04g01075 587 MobiDBLite consensus disorder prediction 49 79 - -
Adu04g01075 587 CDD bHLH_AtMYC1_like 397 459 IPR045896 -
Adu04g01075 587 Gene3D - 396 464 IPR036638 GO:0046983
Adu04g01075 587 PANTHER TRANSCRIPTION FACTOR BHLH91 113 581 IPR045895 GO:0006355|GO:0048658
Adu04g01075 587 SMART finulus 396 445 IPR011598 GO:0046983
Adu04g01075 587 MobiDBLite consensus disorder prediction 1 81 - -
Adu04g01075 587 Pfam Helix-loop-helix DNA-binding domain 398 439 IPR011598 GO:0046983
Adu04g01075 587 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 390 439 IPR011598 GO:0046983
Adu04g01075 587 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 393 452 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu04g01075 Adu-Chr4 20130385 20135204 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu04g01075 314 584 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G31220 45.667 4.33e-72 237
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Adu04g01075 HLH 1.3e-09 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu04g01075 - - gmx:100782512 498.819