Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu04g01067 ATGATACTACTACTACTATTCTTCTTCCTGGGCCTTTCTAATGGCGCCAACAACGTGACTGAAACTACTCTCAAAGTTCTTTTGGAGGTGAAGTCATCGTTTCTTCAAGACCCACTGAAGGTTCTGGCGGATTGGAGATTCAACAACACTAACTACTGTTCATGGAATGGAATCACATGCAATGATGATAAAACCGTCGTGGGAATCAACCTATCTTCCTCTTCACTCAATGGCTCAATATCACCGTCACTCTCTCGTTTACAATCTCTTCTTCATCTTGACCTCTCTTCTAACAGTCTTGTGGGTCCCATCCCTGTCACTCTCACTAACCTCACTTCATTGGAGTCCCTTCTTCTTCTCTCCAACCAACTCACCGGTCACGTTCCCGCCGAGTTCGGCTCCATGCTCACTCTCCGAATCCTCAAACTCGGTGATAACCTACTCACTGGTTTTATTCCTCCTTCGCTTGGGAACCTCGTCAAGCTTAGCTTTCTTGGACTCGCCTATAACGCACTCGCTGGAACGATTCCAACTCATCTAGGTCAACTCACCGAGTTGCAGCAGCTGGTTCTTAAGGGAAATATGTTGACGGGGACGATTCCCGTTGAGTTAGGGAACTGCTTCAGTCTCCAGATACTCAACCTTGCAAGTAACAAGCTGACGGGTCAGTTACCGAGTCAACTCGGGGAGCTGAGTGAACTCACTGACTTGGTCCTCATGGATAACCAGCTTGTGGGTAACATTCCAAAGTCTCTTTTTCAACTGGGCAAGCTTCAAATTCTGGACTTGTCAATGAACAATCTCACTGGAGAGGTTCCAGGTGAGTTTGGAAACTTGAGAGAGTTACAGAACTTGAGTCTCTCTTGGAACCAATTTCATGGTAGTACTATTCCTAGTACTATGTGTTCCAATAATGCATCAAAGTTGGTGTCTTTGAGTATTTCAGATTGTGGGCTTCATGGTGTGATTCCAATTGAGTTAGCTCAGTGTGTATCATTGAAGGTTCTTGATTTGGCTAATAACTCTCTCAGTGGTTCAATCTCTCCCTTCATTATTGGGAACCTTACAAATTTGGAGGAAATTTATTTGTACAGAAACAAGCTGAATGGTTCTTTTCCTAGAGAGATTGGGAAGCTTGGCAAGTTGCAAAGTTTGTCCCTTTTTGAGAATCAATTATCTGGGCAGATACCTTTGGAGATTGGTAACTGTCTAGGGTTGCAATTGATTGATCTTTTTGGGAACCAATTCAGTGGTGGGATTCCGATCACTATTGGAAGGCTTAAAGAGTTGAATTGGTTTCACCTTAGGAATAATAACCTTGAGGGGAAAATTCCTGCCACACTTGGTAACTGTCAAAAGATGAAGATGATTGATCTGGCAAATAATCAGCTATCAGGTTCAATTCCAGCAACATTAGGGTTCCTGAGAGGATTGGATCAGCTCATGCTATACAACAATTCTCTTGAAGGCAATCTTCCTCACCAGCTTGCAAATGTAGCAAACTTGACAAGAGTGAACCTTTCAAGGAACAAGCTTAATGGTAGTTTAGCTCCATTGTGTAGCTCAAGTTCATTTCTTTCCTTTGATGTAACTGATAATAAATTTGATGGTGTGATTCCCTTTCAATTGGGAAATTCACATTCTCTTGATAGGCTCAGATTAGGTAACAATAGATTTTCTGGTGAAATTCCAAGGACATTGGGGAAAATCACTGAGATGACATTGTTAGACTTATCAAGAAACTCACTCTCTGGACCAATACCAGATGAGCTTTCCTTGTGTCACAATCTTTCCCACATTGATCTGAACAATAATTCGCTGACCGGACCGATACCATCGTGGCTTGGAATCTTGCCGGAACTGGGAGAGCTTAAGCTCTCATTCAATCAACTTTCTGGGTCTCTTCCATTAGGCCTATTCAATTGTACAAAGTTGCTAGTACTCTGCCTTGATGGAAATTCCCTTAATGGAAGCCTCCCAGGGCATATTGGTAATCTTACATCACTGAATGTCCTTAGTCTTGGCCAAAACAATCTCACTGGGTCAATTCCTCAAACAGTTGGTAGGCTAGTCAACCTTTATGAGCTGCAGCTTTCAAGAAATGGATTCAGTGGTGAGATCCCATTTGAGATTGGAAACCTCCAGAATCTTCAGAACATTCTGGACCTCAGTTACAATAATCTCTCTGGTGAGATCCCAAGTTCAATTCGTTCGCTTTTGAAATTGCAAGCTCTTAATCTTTCCCACAATCAACTCAGTGGTGGAGTCCCTCTGCTGCTTGGTGAAATGTCAAGCTTGGACCAACTTGATCTCTCTTACAATAATTTACAAGGCCAGCTGGATATGCGATTCTGTCGCCGCTGGCCTTTCGAAGCTTTTGCCGGGAACCTTCGCCTTTGCTGGGCCTCTAAGTGCAGCAAAGGCAATGGTTACAGCAATAAGCTACCAATGATGAGTCTGTCAGCACTAGTTATAGTCTTTTCCGTTTCAAGTATTGTTGCAATTGCAATACTAATGTTTGCAGGCAGAGTTTTCCTTAAAAACAAGCAAGAAATTTTTAGGAAGTTTGGTGAAGTGAATTGCATTTACTCCTCTTCTTCACATGCAAAGAAGCGATTTCTGCTTCCTCTTAACATTGGTGGGAACCGAGAATACAGGTGGGAAGATATCATGGATGCTACAAACAATCTAAGTGAGGAATTCATCATTGGTTCTGGAGGTTCCGGGACGGTGTACCGAGCCGAATGGGCCACCGGAGAGACAGTAGCTGTGAAGAAGATTTCATTCAAAGATGAGTATCTCTTAAACAAGAGCTTCATAAGAGAAATGAAGACTTTGGGGAGGATTAGGCATAGACATTTGGTGAAACTGATTGGTTGTTGTAGCAACAGAAAGAAAGGATGTTCAGGTTGGAATCTGCTGATATATGAGTACATGAAGAATGGGAGTGTGTGGGATTGGCTTCATGGAAGAACATTGAAGGAAAAAGGGATTCTTGATTGGGATGCAAGGTTCAGAATTGCTGTGGGATTGGCTCATGGATTAGAGTACCTTCATCATGATTGTGTTCCAAAGATTATTCATAGGGACATCAAGACCAGTAACATATTGCTGGATTCAAAGATGGATGCACATTTGGGAGATTTTGGACTTGCAAAAGCACTCATTGACAATTCTGACTCCACTTCCTGTTTTGCTGGCTCTTATGGTTACATAGCCCCTGAGTATGCATACACAATGAAGGCAACAGAGAAGAGTGACGTGTACAGTATGGGAATTGTGTTTATGGAACTTGTAAGTGGCAAAATGCCAACAGATGAAGCTTTCAGGGGAAACATGGACATGGTGAGATGGGTGGAGATGCACTTCCACAACCAAGATGCCGCCATGCGTCAGGAGCTCATAGATCCTGAGCTGAAGCCGCCTTTACCCACCGAGGAGTTCGCGGCGTTCCAAGTGGTTGAGATAGCTATGCAGTGTACAAAAACTGCACCACAGGAGAGGCCATCTTCAAGGCAAGTTTGTGATCTTCTTCAGCATGTTGCCAAAAACAAGAGATTCAAATTTGAGAAGAAGGAACATTGGGAGTCAACACAAGTGATTTGA 3606 0.4298 MILLLLFFFLGLSNGANNVTETTLKVLLEVKSSFLQDPLKVLADWRFNNTNYCSWNGITCNDDKTVVGINLSSSSLNGSISPSLSRLQSLLHLDLSSNSLVGPIPVTLTNLTSLESLLLLSNQLTGHVPAEFGSMLTLRILKLGDNLLTGFIPPSLGNLVKLSFLGLAYNALAGTIPTHLGQLTELQQLVLKGNMLTGTIPVELGNCFSLQILNLASNKLTGQLPSQLGELSELTDLVLMDNQLVGNIPKSLFQLGKLQILDLSMNNLTGEVPGEFGNLRELQNLSLSWNQFHGSTIPSTMCSNNASKLVSLSISDCGLHGVIPIELAQCVSLKVLDLANNSLSGSISPFIIGNLTNLEEIYLYRNKLNGSFPREIGKLGKLQSLSLFENQLSGQIPLEIGNCLGLQLIDLFGNQFSGGIPITIGRLKELNWFHLRNNNLEGKIPATLGNCQKMKMIDLANNQLSGSIPATLGFLRGLDQLMLYNNSLEGNLPHQLANVANLTRVNLSRNKLNGSLAPLCSSSSFLSFDVTDNKFDGVIPFQLGNSHSLDRLRLGNNRFSGEIPRTLGKITEMTLLDLSRNSLSGPIPDELSLCHNLSHIDLNNNSLTGPIPSWLGILPELGELKLSFNQLSGSLPLGLFNCTKLLVLCLDGNSLNGSLPGHIGNLTSLNVLSLGQNNLTGSIPQTVGRLVNLYELQLSRNGFSGEIPFEIGNLQNLQNILDLSYNNLSGEIPSSIRSLLKLQALNLSHNQLSGGVPLLLGEMSSLDQLDLSYNNLQGQLDMRFCRRWPFEAFAGNLRLCWASKCSKGNGYSNKLPMMSLSALVIVFSVSSIVAIAILMFAGRVFLKNKQEIFRKFGEVNCIYSSSSHAKKRFLLPLNIGGNREYRWEDIMDATNNLSEEFIIGSGGSGTVYRAEWATGETVAVKKISFKDEYLLNKSFIREMKTLGRIRHRHLVKLIGCCSNRKKGCSGWNLLIYEYMKNGSVWDWLHGRTLKEKGILDWDARFRIAVGLAHGLEYLHHDCVPKIIHRDIKTSNILLDSKMDAHLGDFGLAKALIDNSDSTSCFAGSYGYIAPEYAYTMKATEKSDVYSMGIVFMELVSGKMPTDEAFRGNMDMVRWVEMHFHNQDAAMRQELIDPELKPPLPTEEFAAFQVVEIAMQCTKTAPQERPSSRQVCDLLQHVAKNKRFKFEKKEHWESTQVI 1201
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu04g01067 1201 ProSitePatterns Protein kinases ATP-binding region signature. 903 926 IPR017441 GO:0005524
Adu04g01067 1201 SUPERFAMILY L domain-like 424 564 - -
Adu04g01067 1201 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1026 1038 IPR008271 GO:0004672|GO:0006468
Adu04g01067 1201 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE GSO1 306 1193 - -
Adu04g01067 1201 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE GSO1 3 299 - -
Adu04g01067 1201 Gene3D Ribonuclease Inhibitor 175 275 IPR032675 -
Adu04g01067 1201 SUPERFAMILY Protein kinase-like (PK-like) 876 1178 IPR011009 -
Adu04g01067 1201 Pfam Leucine rich repeat 332 392 IPR001611 GO:0005515
Adu04g01067 1201 Pfam Leucine rich repeat 233 292 IPR001611 GO:0005515
Adu04g01067 1201 Gene3D Transferase(Phosphotransferase) domain 1 979 1200 - -
Adu04g01067 1201 SUPERFAMILY RNI-like 69 393 - -
Adu04g01067 1201 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 306 1193 - -
Adu04g01067 1201 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 3 299 - -
Adu04g01067 1201 SMART serkin_6 897 1183 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu04g01067 1201 Gene3D Phosphorylase Kinase; domain 1 860 978 - -
Adu04g01067 1201 ProSiteProfiles Protein kinase domain profile. 897 1183 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu04g01067 1201 Gene3D Ribonuclease Inhibitor 21 174 IPR032675 -
Adu04g01067 1201 SUPERFAMILY L domain-like 520 780 - -
Adu04g01067 1201 Pfam Protein kinase domain 902 1175 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu04g01067 1201 Pfam Leucine rich repeat N-terminal domain 25 61 IPR013210 -
Adu04g01067 1201 SMART LRR_typ_2 739 762 IPR003591 -
Adu04g01067 1201 SMART LRR_typ_2 111 134 IPR003591 -
Adu04g01067 1201 SMART LRR_typ_2 570 594 IPR003591 -
Adu04g01067 1201 SMART LRR_typ_2 763 795 IPR003591 -
Adu04g01067 1201 SMART LRR_typ_2 427 451 IPR003591 -
Adu04g01067 1201 SMART LRR_typ_2 666 690 IPR003591 -
Adu04g01067 1201 SMART LRR_typ_2 279 304 IPR003591 -
Adu04g01067 1201 SMART LRR_typ_2 714 738 IPR003591 -
Adu04g01067 1201 SMART LRR_typ_2 618 642 IPR003591 -
Adu04g01067 1201 SMART LRR_typ_2 183 207 IPR003591 -
Adu04g01067 1201 SMART LRR_typ_2 379 403 IPR003591 -
Adu04g01067 1201 SMART LRR_typ_2 87 110 IPR003591 -
Adu04g01067 1201 SMART LRR_typ_2 255 278 IPR003591 -
Adu04g01067 1201 SMART LRR_typ_2 355 378 IPR003591 -
Adu04g01067 1201 SMART LRR_typ_2 499 523 IPR003591 -
Adu04g01067 1201 Gene3D Ribonuclease Inhibitor 473 809 IPR032675 -
Adu04g01067 1201 Gene3D Ribonuclease Inhibitor 285 472 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu04g01067 Adu-Chr4 19635720 19639693 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu04g01067 165 1186 Receptor kinase-like Gene Family AT1G73080 35.815 0.0 597
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Adu04g01067 Pkinase 1.3e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu04g01067 - - gmx:100797153 1498.41