Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu04g01046 ATGAAGGAAAAGGAGATTTGGAACAAGAAAAAGAACGACAAACGAGATCCAGATTTAAGTAGAGATAGCAAGGTCGCCGGTTTGCTCCGCCACTACTGTCGCCGGAGAAGATCGTCGACTGCTGACAAGGTAAATGGTGACGGCGGTAACGGTGCCATTAGGAGGGTGACAATGGCAAAGAGGATGTCCTTCAATGGCGAGGCGAGGCGAGGGTGCGGCAAGACGAGAAGAACAGGGTTTAGGGTTTTCTGCAGAATTTTGATCCAAACTGGCATAACACAAAGCAATCCATGGCCATGGCATTCTTTGAGACTATCCTCAACCCTTTCTTCTTCTTCTTCTTCAAGTTCCAGAGGCAATTCTTTCATTGTCTCATACCTCGTCGGAACTTGTGGGTTCTCACCAGAACGCGCAGTTTACATTTCCAAGCGCTTCAGCTTCGAAACAAGCGATAAACCAGATGCAGTGATTTCGTTCATCAAGAATATCGGTCTCTCCCAAACGACGACGTTGAGAGTCATCCAATCTCTGCCCCAATTACTCGTAGCAAACCCTAAAACTCTTCAGCCAAAAATCGATTTTTTCAAGTCCAAAGGGTTTTCCTCCTCTGACATATGCAGGATCATAGAAGGCTGCCCTTCAATCCTCACCCGAAGCTTGCAGAATGAAATCGCTCCCTCCTTCGATTGCTTCGACGCCATGTTTCAGTCTAGGCACAAGCTCATAAAGGCTGCTACCGGTTATTCTGCTATGCTGTATGATTTTGCAAGGTTTACAGAACCTAATATAAAGCTTCTTAGAGATGAAGGAGTTGCTGAATCACATATTGTTAGGTTAATTCAGTACTACCCCAACCAATTGAAGAATAGCCCTAAGAAGTTTAAGGAGGCATTGCAAGAAGTTAAGGAGATGAAGTTTGATCCCTTGACGTTTCAATTTATTGTGGCTATTCACGTGAAGACAAAAATAGGAAAATCCACATGGGAAAGAAAGGAAGGAATTTATAGAAAGTGGGGTTGGACCGATGCCGATATTATCACAGCTTTCAGACGCTGTCCGTGGTGCTTCGCCAGCTCCGACAACAAGATTGAAGCAGTCATGGATTTTTTGTCTAAGGGTCTGGTGAGGAAGCTGGGCTTGGCTTCAGTGTTTAGGATTAATGAAAAGACCTTCTTGATCTCATTGTGGTTGCATTTGCTGTGTCATGTAAACAGGCTAATCGTCTCTTTCACAGGTTTCGCATCCAGATCTGAGTTTCGAAAAATTTCCAGCACAGCTGTTTGGGAGACGAAAAAGAGGTTGTCAAACAATAACAACGAGCTATACCTCGAAGTGCATATCCTCGACGGAACATATATGATAAAAGAAAAGATTTTAGAAGGGTGGGATTGGTGGTGGTGTAGGCCGGAAGATTGTAATAGGCTTGGGGTATTTTTGGTGGAGGCCGGTGGGAGTGGCATAAAGGTAAAGGTTAAGTGGGGTTGA 1485 0.4458 MKEKEIWNKKKNDKRDPDLSRDSKVAGLLRHYCRRRRSSTADKVNGDGGNGAIRRVTMAKRMSFNGEARRGCGKTRRTGFRVFCRILIQTGITQSNPWPWHSLRLSSTLSSSSSSSSRGNSFIVSYLVGTCGFSPERAVYISKRFSFETSDKPDAVISFIKNIGLSQTTTLRVIQSLPQLLVANPKTLQPKIDFFKSKGFSSSDICRIIEGCPSILTRSLQNEIAPSFDCFDAMFQSRHKLIKAATGYSAMLYDFARFTEPNIKLLRDEGVAESHIVRLIQYYPNQLKNSPKKFKEALQEVKEMKFDPLTFQFIVAIHVKTKIGKSTWERKEGIYRKWGWTDADIITAFRRCPWCFASSDNKIEAVMDFLSKGLVRKLGLASVFRINEKTFLISLWLHLLCHVNRLIVSFTGFASRSEFRKISSTAVWETKKRLSNNNNELYLEVHILDGTYMIKEKILEGWDWWWCRPEDCNRLGVFLVEAGGSGIKVKVKWG 494
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu04g01046 494 SMART mt_12 206 249 IPR003690 GO:0003690|GO:0006355
Adu04g01046 494 SMART mt_12 171 201 IPR003690 GO:0003690|GO:0006355
Adu04g01046 494 SMART mt_12 346 377 IPR003690 GO:0003690|GO:0006355
Adu04g01046 494 SMART mt_12 277 307 IPR003690 GO:0003690|GO:0006355
Adu04g01046 494 Pfam mTERF 157 387 IPR003690 GO:0003690|GO:0006355
Adu04g01046 494 PANTHER TRANSCRIPTION TERMINATION FACTOR FAMILY PROTEIN, PUTATIVE ISOFORM 1-RELATED 104 370 - -
Adu04g01046 494 PANTHER CGI-12 PROTEIN-RELATED 104 370 IPR003690 GO:0003690|GO:0006355
Adu04g01046 494 Gene3D Transcription termination factor 3, mitochondrial 134 252 IPR038538 -
Adu04g01046 494 Gene3D Transcription termination factor 3, mitochondrial 253 396 IPR038538 -
Adu04g01046 494 MobiDBLite consensus disorder prediction 1 21 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu04g01046 Adu-Chr4 19228408 19236699 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Adu04g01046 mTERF 8e-23 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu04g01046 K15032 - qsu:111987836 226.098