Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu04g01045 ATGTCTCGATTTCTCATTCTACCCAAACACTTTGCTTCCATCAATCCATGGCCATGGCTTTCTTTGAGTCTCTTCTCAACTCGTTCTTCTTCTTCAAGATCCAAAGGCAAGTCTTTCACTGTCTCATACCTCGTTGGAACTTGCGGGTTCTCACCAGAACGTGCAGTTTCCGTTTCCAAACGCTTTAGCTTCAAAACAAGCGAAAGACCAGACACAGTGATTGCGTTCTTCAGGAACATTGGGTTATCCCAAACGTCACTGTTCAGAGTCCTCCAATCCATGCCACAGTTACTCGTAGCCAGTCCCGAGAGATCTTTGCAGCCAAAAATCGATTTTTTTAAGTCCAAAGGGTTTTCTACCTCTGATATATGCAAGACCATTGTTAATAACCCTTTGATCCTCATCCGAAGCGTGCAGGTTCAGATAGCTCCCGCGTTTGATTTCTTCGATGACATGTTTCCCTCTAGGGATAAGCTCATCAAAGCTATTATCCGTAATTCGAGTATTCTCTATGACTTTAAAATATATGTAGAACCTAATATAAAGCTGCTTAGAGAAGCAGGAGTTCCTATTTCACATGTTATTAGGTTAATAGAATACTGCCCTCGCCAATTGAAGGCAAACCCTAAGAGGTTTAAGGAGGTATTGCAGGAAATTAAGGAGATGAAGTTTGATCCCTTCAAGTTTCAATTTGTTGTGGCTATTTATGTGAATGTAACCGTAGGAAAATCCTCATTGGCAAGAAGGAAAGGTATTTATAGAAAGTGGGGTTGGACCGATGGCAATATTTTTGCAGCATTTAGAAACCATCCGTGGTGTCTTGTCATCTCGGATGACAAGATTGAAGCAATCATGGATTATCTGGTGAATGAATTGGGTTATTCCGCTTCTTCTATATCTAGTAATCCCTGGGTGTTGTCCATGAGTTTGAAAAGGCGGATTATTCCCAGGGGTTCTGTTATTCTAGTTTTGCAGTCTAAGGGTCTGGGGAGGAAGCTGGGCTTGGGTACAATATTTAGGTGCAATGAAGAGATCTTCTTGAATAAGTTTATCTTCCGCCATGAGAAAGAAGCTGACGATCTATTGAAGTTGTATCAAGCTAATTTAGGAAAAGAGCAAGAGTTAATGATATCAGGTGAACAGAGGGTTGACTTCTCAGTAGTGAGGGAGCTTGGAGAGAAATTACTTATTTTAGGAGCTAACTAG 1206 0.4113 MSRFLILPKHFASINPWPWLSLSLFSTRSSSSRSKGKSFTVSYLVGTCGFSPERAVSVSKRFSFKTSERPDTVIAFFRNIGLSQTSLFRVLQSMPQLLVASPERSLQPKIDFFKSKGFSTSDICKTIVNNPLILIRSVQVQIAPAFDFFDDMFPSRDKLIKAIIRNSSILYDFKIYVEPNIKLLREAGVPISHVIRLIEYCPRQLKANPKRFKEVLQEIKEMKFDPFKFQFVVAIYVNVTVGKSSLARRKGIYRKWGWTDGNIFAAFRNHPWCLVISDDKIEAIMDYLVNELGYSASSISSNPWVLSMSLKRRIIPRGSVILVLQSKGLGRKLGLGTIFRCNEEIFLNKFIFRHEKEADDLLKLYQANLGKEQELMISGEQRVDFSVVRELGEKLLILGAN 401
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu04g01045 401 Gene3D Transcription termination factor 3, mitochondrial 52 171 IPR038538 -
Adu04g01045 401 Gene3D Transcription termination factor 3, mitochondrial 172 364 IPR038538 -
Adu04g01045 401 SMART mt_12 160 190 IPR003690 GO:0003690|GO:0006355
Adu04g01045 401 SMART mt_12 264 295 IPR003690 GO:0003690|GO:0006355
Adu04g01045 401 SMART mt_12 296 330 IPR003690 GO:0003690|GO:0006355
Adu04g01045 401 SMART mt_12 88 119 IPR003690 GO:0003690|GO:0006355
Adu04g01045 401 SMART mt_12 124 154 IPR003690 GO:0003690|GO:0006355
Adu04g01045 401 SMART mt_12 195 225 IPR003690 GO:0003690|GO:0006355
Adu04g01045 401 PANTHER TRANSCRIPTION TERMINATION FACTOR FAMILY PROTEIN, PUTATIVE ISOFORM 1-RELATED 30 371 - -
Adu04g01045 401 PANTHER CGI-12 PROTEIN-RELATED 30 371 IPR003690 GO:0003690|GO:0006355
Adu04g01045 401 Pfam mTERF 147 346 IPR003690 GO:0003690|GO:0006355
Adu04g01045 401 Pfam mTERF 75 225 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu04g01045 Adu-Chr4 19216761 19219407 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Adu04g01045 mTERF 1.9e-18 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu04g01045 K15032 - qsu:111987836 294.664