Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu04g01027 ATGTTGATACCTCAACTTGGAAATAACACTAGGTTCCGTTTATGGCTTGCTCAGCAAGAAGAATCTGTTGTTAAGAGAGCTCTCTTACAACAGATGAACGCAATACTGCCTAAGATTAAACCGAAAAGGTCATCTTTCAAGGTTCAGGTTCATGTTCAGTTAGCACAATACCACAGAATGGGTTCATGTTCAGTTAGCATAATACCACATAATGATCAACATTTTCTAACTGAACTAGCTCAACATTCTTTTGAAATTGATAATCATTTGTCTCCTGACATTTCTAAATTAGAATCTGAGGTATTAAGTGATCCTGTTAACCCTCAAAGAGTTCCTCATAAAATTGAATGGGGTCTAGTTTCTTCCTTTTTTTTATTTTTCCCATTTTTCCCAAAACCCCCGTTCCTCTCGCTCTCGCCCGCTTCTCGCATCCCATCGGTTCTCGGCTTCTCGCCACAACCAAAGGAACTCTTTCTGCTTCCACGCCATCGTCAAAGTCGCTTTTTACTCTCTAAACTGCCTTCCCTTCTCTTCTTGCTCAAGGTGTCCGTGCTCTATTCTTCTGATTTGAGGAAGCTTGTGGATGAAGTAAAGGAATTAGGGTTTGATCCGTCATCGGTTAAATTCGCCATAGCTTTGCTAGCCAAGAAGACTATACGGAAATCACTGTGGGATGCGAAAGTCGATATCTTGAAGAGCTGGGGTTGGTCTAAAGAAACAACGTCCCAAGCATTCTGGAGGAACCCTTTATGTATGCTATCATCTAAGGATAAGATTAATGAGGTGATGAAACTTTGGGTCAATCAATTAGGTTGGGACCCTTTGGCTCTTGCCAAGATTCCATGGCTTTTTGGATATAATTTGGAGAGAAGGATTATTCCGAGGGCTTTTGTTCTTCAGTATTTACTTTCAAGAGGTCTGAGAAACAAGAATGATAATTTAAGTACCCCATTTTATGTTTCTGAAGAGTTGTTCTTTAACAAGTTTGTGGAATGTTTTACCGAGGAAAGGTCTCAACTACGTAAGATATACTATGAGAAAAAAGGATGTTCATGA 1056 0.3977 MLIPQLGNNTRFRLWLAQQEESVVKRALLQQMNAILPKIKPKRSSFKVQVHVQLAQYHRMGSCSVSIIPHNDQHFLTELAQHSFEIDNHLSPDISKLESEVLSDPVNPQRVPHKIEWGLVSSFFLFFPFFPKPPFLSLSPASRIPSVLGFSPQPKELFLLPRHRQSRFLLSKLPSLLFLLKVSVLYSSDLRKLVDEVKELGFDPSSVKFAIALLAKKTIRKSLWDAKVDILKSWGWSKETTSQAFWRNPLCMLSSKDKINEVMKLWVNQLGWDPLALAKIPWLFGYNLERRIIPRAFVLQYLLSRGLRNKNDNLSTPFYVSEELFFNKFVECFTEERSQLRKIYYEKKGCS 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu04g01027 351 PANTHER TRANSCRIPTION TERMINATION FACTOR FAMILY PROTEIN 177 347 - -
Adu04g01027 351 Gene3D Transcription termination factor 3, mitochondrial 132 342 IPR038538 -
Adu04g01027 351 Pfam mTERF 226 323 IPR003690 GO:0003690|GO:0006355
Adu04g01027 351 PANTHER CGI-12 PROTEIN-RELATED 177 347 IPR003690 GO:0003690|GO:0006355
Adu04g01027 351 SMART mt_12 242 273 IPR003690 GO:0003690|GO:0006355
Adu04g01027 351 SMART mt_12 274 308 IPR003690 GO:0003690|GO:0006355
Adu04g01027 351 SMART mt_12 176 203 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu04g01027 Adu-Chr4 18496347 18499123 Proximal
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Adu04g01027 mTERF 9.3e-10 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu04g01027 K15032 - gmx:100792944 209.534
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu01g02663 01 95987714 96022313 Adu04g01027 04 18496347 18499123 PCT