Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu04g01024 ATGTTTAACTCCCACCGTTACAAACCCCTTATCTATCTAAACCTAAAAGTTCTATTCCGAAGAACACAACCACACATGTTctgcacttcacaatcacactctttgacggtttcatacctcatcaataaccttggcttcaccccacaatctgctctaaacgcatcaaaacggcatcgtttcaagaccccacacaaggcagacttaataatcgcattcttcaagacccatggattctcccattcccaaatcgctgccattgttgccaagctacctaagatactttcagccaatccggaaagaatcctgccaaagtttcaatttctggcctccaaaggtgcttcCACCGATGACATTGTTCTGCTATCCACTAGGAACCCTAGATTCTTGCATTTGAGCCTCAAGAACAACATAATCCCTACTTATGCAATGCTGAAAACCTTCTTTCAATCCGATGAGAAAACGCTCCGTTGCATTGCTTCTATCCCTGGTTTGTTTATGGAGGCTCGCTTGGTGAAAAATGTCAAGTTGTTGGCTGATGCAGGAGTCTCTGACTCCGCTATCGGCTATTTGTTGCGGACCAGAGTTTTAGTGCTCTTGTCTGCTGACTTGAGGAAGCAGGTGGATGAAATAAAGGAATTAGGGATTGATCCTTCAACGGTTAAGTTCGCCATAGCTTTGCAAGCCAAAAAGACTGTACCGAAATCACTGTGGGATGCAAAAGTCAATGTCTTGAAGAGCTGGGGTTGGTCTAAAGAAACAATGTCCGAAGCATTCAGGAGGAACCCTTTATGTATGCTATCATCTAAGGATAAGATTAATGAGGTGATGAAACTTTGGGTCAATCAGTTAGGTTGGGACCCTTTGGCTCTTGCCAAGATTCCATGGCTTTTTGGATATAATTTGGAGAGAAGGATCATTCCGAGGGCTTTTGTTCTCCAGTATTTACTTGCAAAAGGATTGAGAAACAAGAGTGACAATTTGTGTCTGCCGTTTTTTATTCCGGAAGACATGTTCCTTAAAAGATTTGTGGAAAGTTTTACAGAAGATATGTCTCAACTACTTAAGATATACCATGAGAAAAAAAAGATGTTTATGATAACTGCCTAG 1107 0.3117 MFNSHRYKPLIYLNLKVLFRRTQPHMFCTSQSHSLTVSYLINNLGFTPQSALNASKRHRFKTPHKADLIIAFFKTHGFSHSQIAAIVAKLPKILSANPERILPKFQFLASKGASTDDIVLLSTRNPRFLHLSLKNNIIPTYAMLKTFFQSDEKTLRCIASIPGLFMEARLVKNVKLLADAGVSDSAIGYLLRTRVLVLLSADLRKQVDEIKELGIDPSTVKFAIALQAKKTVPKSLWDAKVNVLKSWGWSKETMSEAFRRNPLCMLSSKDKINEVMKLWVNQLGWDPLALAKIPWLFGYNLERRIIPRAFVLQYLLAKGLRNKSDNLCLPFFIPEDMFLKRFVESFTEDMSQLLKIYHEKKKMFMITA 368
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu04g01024 368 PANTHER CGI-12 PROTEIN-RELATED 26 362 IPR003690 GO:0003690|GO:0006355
Adu04g01024 368 SMART mt_12 119 151 IPR003690 GO:0003690|GO:0006355
Adu04g01024 368 SMART mt_12 287 321 IPR003690 GO:0003690|GO:0006355
Adu04g01024 368 SMART mt_12 255 286 IPR003690 GO:0003690|GO:0006355
Adu04g01024 368 SMART mt_12 84 114 IPR003690 GO:0003690|GO:0006355
Adu04g01024 368 Gene3D Transcription termination factor 3, mitochondrial 166 356 IPR038538 -
Adu04g01024 368 PANTHER TRANSCRIPTION TERMINATION FACTOR FAMILY PROTEIN 26 362 - -
Adu04g01024 368 Pfam mTERF 239 321 IPR003690 GO:0003690|GO:0006355
Adu04g01024 368 Pfam mTERF 71 220 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu04g01024 Adu-Chr4 18433458 18435631 Dispersed/Proximal
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Adu04g01024 mTERF 5.5e-20 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu04g01024 K15032 - gmx:102666739 362.844
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu01g02662 01 95979993 95986650 Adu04g01024 04 18433458 18435631 PCT