Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu04g01014 ATGGCTACTTCATTCAACATGATTAAGGATCTTGATATTGCTGTTGCTAATCAAGTTTGGCGTATCAAAGTGCGTGTCATCAAAATATGGTCTATTAATTTAGGCGAAGAGAAGTTCAGGAGACCTAACTTAGAGATGGTTGTTATGGATGAATTAGGTGATCGGATACAATGTTCTGTAAGGAATCCTTTGAGGAGATTATTTGAGCAGGAGTTAGTTGAGGGCAATGTGTACTCTGTTGCTAACTTCTCTATTGAACTTAATGATCAAAAATCTAAGGGTAAGATAAGGTGTACATTGTGGGAGGAGTTTGCTACTCAACTGGTGAAGCACATGGAGCAGTACCCTAATACTGAGTTCATTATTATTGTGCAGTTTGCCAAATTTAACCTGTTCAAGGGAACCATGGGCATATCTAATACAAACTACAACTCTACCTTATACATTAACGCTGATCTTAAAGAAGTTAAAGAATTTAGACAAAGGTTTATCATGGGTAATGACAAGCCATCTAACCAGCTTTCTCAAATTGCATCTGATTCATTGATTTCCCTTGAGCAAGATCTTATTAACCATACTCCTTACAAGTCTATAAGCGAACTTAAGGAGAGCACTGAGGGTGGAATATTTGTTACCATTGGAACTGTGATTTCTATTGATACTAGACTAGGTTGGTGGTACAAAGGGTACAAGATGTGTTTTCATTCACTTAAAGAAGATGAGAATTCATATTATTGCCATAAATGTGATATTTATCCTAATACTCATGTTCCTCGTTTCTGCATTCAAATGAGAGTATCAGATGAGACAGACTCTGCTTCATTTATTGTTTATGACAAGGAAGCCTCCAAATTTCTTGAGATATCTGCTTCTGAGCTTCGTTTGAGACAGATATCAAAGGGTTGCGGCAAGGATGAATTTCCGGTTGAGATTAATTCATTTAGGGGTAAGAAGTTTCTATTCAAGATTTCTGTGAAGCTTGATGATATCAATGCTTTCCAGCCATGCAAGATTACTGTTTTGAAGTTGACTGAAAATCCAAATCTGCTCACTTCTTTTTCTTCCAAGTACAAGACATTTGATAACATCCCAATCGAAAATACTGAGTTGCAGAGTTTGCAAACTGATTCTACTGATAATTCTAAGGAGATTAGTTCACAGTCTTGCGAAATTATTTCTCTTGATGGCAATGATGACTTTGTAACTCCTAAGAGAGGTATGATAGCTGGTGTAACGGCAAAAAATTTGCTGGACATTTTCCCGGCATTTGCTGGACATTTTTCCGGATAA 1290 0.3682 MATSFNMIKDLDIAVANQVWRIKVRVIKIWSINLGEEKFRRPNLEMVVMDELGDRIQCSVRNPLRRLFEQELVEGNVYSVANFSIELNDQKSKGKIRCTLWEEFATQLVKHMEQYPNTEFIIIVQFAKFNLFKGTMGISNTNYNSTLYINADLKEVKEFRQRFIMGNDKPSNQLSQIASDSLISLEQDLINHTPYKSISELKESTEGGIFVTIGTVISIDTRLGWWYKGYKMCFHSLKEDENSYYCHKCDIYPNTHVPRFCIQMRVSDETDSASFIVYDKEASKFLEISASELRLRQISKGCGKDEFPVEINSFRGKKFLFKISVKLDDINAFQPCKITVLKLTENPNLLTSFSSKYKTFDNIPIENTELQSLQTDSTDNSKEISSQSCEIISLDGNDDFVTPKRGMIAGVTAKNLLDIFPAFAGHFSG 429
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu04g01014 429 PANTHER ANIMAL RPA1 DOMAIN PROTEIN 92 293 - -
Adu04g01014 429 SUPERFAMILY Nucleic acid-binding proteins 4 90 IPR012340 -
Adu04g01014 429 SUPERFAMILY Nucleic acid-binding proteins 85 163 IPR012340 -
Adu04g01014 429 Pfam Replication factor-A C terminal domain 212 344 IPR013955 -
Adu04g01014 429 CDD RPA1_DBD_B_like 71 164 - -
Adu04g01014 429 Gene3D - 186 354 IPR012340 -
Adu04g01014 429 CDD RPA1_DBD_C 198 342 IPR013955 -
Adu04g01014 429 Gene3D - 5 173 IPR012340 -
Adu04g01014 429 SUPERFAMILY Nucleic acid-binding proteins 193 345 IPR012340 -
Adu04g01014 429 PANTHER REPLICATION FACTOR A 1, RFA1 92 293 IPR004591 GO:0003677|GO:0005634|GO:0006260|GO:0006281|GO:0006310
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu04g01014 Adu-Chr4 18182417 18184921 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu04g01014 85 340 Core DNA Replication Machinery Family AT5G08020 23.574 1.95e-08 54.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu04g01014 - - adu:107490971 667.151