Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu04g01008 ATGCTTGGTCCTGAAACAGAACTTAAGATAAGTTTTGGCTACCAATGCAATGGCATTGCAGATATCTCGTGCAAGTCTATCAACGGCTACAAAATCCTTCCTTATTTCCCTAGAACAAGCAGTTTCTCTTGCTTGTCTGGTGCTGCCGTTAGCGCAAATGCTACACTTGCCAACACAAACATCTGCAATGGTGTGATAGGGGAAGAAATCCTTCCTAGTTTGGACTCTCCTAAATCGTTTCGTAAGATACCCTCTTCGCCAAGTCTTTCGAAGTTGGACATACTATCATCTTCTCTCCATGGTAGTTTCTCAAACCTCAGTTGCAGTCCATCCACACAAAGTGATATGTTTGATTATGACGCTTGTATGGTGAGTGCTCCTTGCAAAAGTGAAGGATTTCTCAATGCTATGGAAGTACAAGTAGCAGGGGGAGCTGCTGGTGAAGATAGAGTTCAAGCAGTTTGTTCTGAAGAAAATGGCTGGCTCTTTTGTGGAATTTATGATGGCTTTAATGGCAGGGATGCAGCTGACTTTCTGGCCTGTACCCTTTACGACACTATCATATCTTATTTTAATATGCTGTATTTGGATTTGGAATCAGATTCTATCAAAGCTTCCAACAGTCTTGATTTGGGTGGATCATCTCAATATGAGTTGGATGAGCATCAATCTCGTTCTCAGAAATCATTTTCACATGCTATTCTTGATAGCCTCCAACGTGCTCTCAATCAGGTTGAGAATGATTTCTTGTACATGGTTGAGCAGGAAATGGAGGACCGTCCGGATTTAGTTTCTGTCGGATCTTGTGTTTTACTTGCACTTCTTCATGGGGAAAATTTGTATACACTTAATCTTGGTGACAGCAGAGCAGTATTGGCAACGTGCAGTATGGATGGCGGAATGAGTGGCAAAGAGAGAAGAATGAAAGCTATCCAGCTTACTGATATGCATACTGTTGACAATGGAGCCGAAAGAGCTCAACTTCTTGCTGGTCACCCTGATGATCCCAAGGCCATCGTAGCTGGGAAAGTGAAAGGAAAATTGAAGGTTACTCGCGCTTTTGGAGTTGGCTACTTGAAAAAGAAAATTCTGAATGATGCATTGATGGGAATTCTTCGAGTGCGTGATCTCATAAGCCCACCATACATTTCCATTCAACCGTCACTAAATGTGCATAGAATCTCAAGTTCCGATCAATTTGCTATAGTTGCGAGTGATGGTTTGTTCGATTTCTTCAGCAATGATGAAGCAGTAGAGCTTGCAGAGTCTTACATCCTAAGCAATCCATTTGGTGATCCAGCAAAATTCCTTGTTGAGCAACTTATAGCAAGAGCTGCTGATTCTGCAGGTTTTAGCACGGAAGAGTTGATGAATGTTCCGGCCGGGAGGAGGAGGAAGTACCATGATGATGTGACCGTGATTGTCATCATCCTTGGGATGAATCAACGGACGTCAAAGGCATCAACTTGCATCTAA 1476 0.4268 MLGPETELKISFGYQCNGIADISCKSINGYKILPYFPRTSSFSCLSGAAVSANATLANTNICNGVIGEEILPSLDSPKSFRKIPSSPSLSKLDILSSSLHGSFSNLSCSPSTQSDMFDYDACMVSAPCKSEGFLNAMEVQVAGGAAGEDRVQAVCSEENGWLFCGIYDGFNGRDAADFLACTLYDTIISYFNMLYLDLESDSIKASNSLDLGGSSQYELDEHQSRSQKSFSHAILDSLQRALNQVENDFLYMVEQEMEDRPDLVSVGSCVLLALLHGENLYTLNLGDSRAVLATCSMDGGMSGKERRMKAIQLTDMHTVDNGAERAQLLAGHPDDPKAIVAGKVKGKLKVTRAFGVGYLKKKILNDALMGILRVRDLISPPYISIQPSLNVHRISSSDQFAIVASDGLFDFFSNDEAVELAESYILSNPFGDPAKFLVEQLIARAADSAGFSTEELMNVPAGRRRKYHDDVTVIVIILGMNQRTSKASTCI 491
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu04g01008 491 Pfam Protein phosphatase 2C 225 432 IPR001932 -
Adu04g01008 491 SUPERFAMILY PP2C-like 147 479 IPR036457 -
Adu04g01008 491 PANTHER PROTEIN PHOSPHATASE 2C 40-RELATED 212 490 - -
Adu04g01008 491 PANTHER PROTEIN PHOSPHATASE 2C 40-RELATED 2 214 - -
Adu04g01008 491 PANTHER PROTEIN PHOSPHATASE 2C 2 214 IPR015655 GO:0004722|GO:0006470
Adu04g01008 491 PANTHER PROTEIN PHOSPHATASE 2C 212 490 IPR015655 GO:0004722|GO:0006470
Adu04g01008 491 SMART PP2C_4 124 476 IPR001932 -
Adu04g01008 491 Gene3D - 117 487 IPR036457 -
Adu04g01008 491 CDD PP2Cc 146 478 IPR001932 -
Adu04g01008 491 ProSiteProfiles PPM-type phosphatase domain profile. 133 478 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu04g01008 Adu-Chr4 17810584 17814405 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu04g01008 4 491 PP2C-type Phosphatase Gene Family AT3G16560 63.673 0.0 590
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu04g01008 - - gmx:102666789 712.99
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu04g01008 04 17810584 17814405 Adu04g01008 04 17810584 17814405 ECH
Adu01g02653 01 95849475 95850820 Adu04g01008 04 17810584 17814405 PCT