Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu04g01000 ATGGAGGATTCAGTAGCGATGCAGAAGCGGAAGCAACGAGAGTTTGCTTTGGCATCAGTCTCTGAGCTCTGTTCTTCTTTGATTCCTCCTCCTCCTTCTGAAGCTGGTTCTTCTTCGCCGGGGATTGCTCGCTTCGCCTCCGGCGATGGCTCCTTGCCAGAACTCCAAATCCTCCGTGAGTCCAATCAGGTTGCTCTCAATGTAGATCTCCGAGCTGCTCAGATATTTAGATTAGGTCCTGTTCAATCGGTTTGCATGGTGGAAGGATCCGATGCGGGCAAACAGACATCATATTCAAGGGGAGTCGCTATTCAGTTTAGAAATGAGGAAGATAGTGAGGCCTTCCATTGTGTATACCAACAATGGAAGAAGGAATTCAATGTTCAAGGGAGTAACCTACCAAATGGAACAAATGCGATAACTTCCAAAAGCAAATTCGATGAAAAGATAGAGTCTTCTTCTGCAAAAATGTATTTCCATTATTATGGACAACTTCTGCATCAGCAAAATATGTTGCAGGACTATGTGAGGACAGGAACATATTATGCTGCAGTTATTGAGAACCGTGCTGATTTCATGGGTCGTGTAGTAGTTGATGTTGGTGCTGGCAGTGGTATTTTGTCGTTATTTGCTGCTCAGGCTGGTGCAAAACATGTTTATGCTGTGGAAGCATCTGAAATGGCAGAATATGCACGAAAACTTATAGCTGGAAACCCAATACTCGGTCAACGAATTACAGTTATCAAAGGCAAAGTGGAGGATGTTGAGTTGCCAGAGAAAGCTGATATTCTGATCTCTGAGCCCATGGGCACTTTGTTAGTTAATGAAAGAATGCTGGAGTCATATGTCATTGCCAGAGACAGGTTTCTCACACCTCATGGGAAAATGTTTCCTTCAGTGGGGAGGATTCACATGGCACCTTTCAGTGATGAATATTTGTTTGTTGAAATTGCTAATAAGGCCCTGTTTTGGCAGCAACAAAACTATTTTGGCGTTGATTTGACACCCTTACATGGGACTGCATTTCAAGGATATTTTTCTCAGGAAGAAGAACTATATGAAATTGACATTCCTCTTAGATTTATATCCACTGTGGGTGCCAGAGTACATGGGTTGGCATGTTGGTTTGATGTATTGTTCAATGGAAGTACTGTACAGAGGTGGCTTACAACTGCCCCAGGTTCACCAACAACTCATTGGTATCAATTACGCTGTGTTCTGTCTCAGCCAATTTATGTCATGGCAGGACAAGAAATTACGGGCAGGCTTCACTTGATTGCCCACAATGCACAAAGTTATACAATTTACTTGACATTATCAGCTAAAATGTGGGGGCCTGGTGCTGAACAAGGAGGGATTCTACAAACATCATCTTGTAAACTTGATCTGAAAGAACCCTACTACAGAATGTCTCAGCCTCAGGTGTATCCAGTATCCCAAGATCAGCAACCTCAATCACTTATACAGACACAGGATGTAAATATCCAATCTCAGGATTTGGATGAAGCTGAGCTAATGCAACAGCCTTCGCCAAATTCATGTGCCCAGATTGACTCCCTCATGCAGAATGCTTAG 1575 0.4317 MEDSVAMQKRKQREFALASVSELCSSLIPPPPSEAGSSSPGIARFASGDGSLPELQILRESNQVALNVDLRAAQIFRLGPVQSVCMVEGSDAGKQTSYSRGVAIQFRNEEDSEAFHCVYQQWKKEFNVQGSNLPNGTNAITSKSKFDEKIESSSAKMYFHYYGQLLHQQNMLQDYVRTGTYYAAVIENRADFMGRVVVDVGAGSGILSLFAAQAGAKHVYAVEASEMAEYARKLIAGNPILGQRITVIKGKVEDVELPEKADILISEPMGTLLVNERMLESYVIARDRFLTPHGKMFPSVGRIHMAPFSDEYLFVEIANKALFWQQQNYFGVDLTPLHGTAFQGYFSQEEELYEIDIPLRFISTVGARVHGLACWFDVLFNGSTVQRWLTTAPGSPTTHWYQLRCVLSQPIYVMAGQEITGRLHLIAHNAQSYTIYLTLSAKMWGPGAEQGGILQTSSCKLDLKEPYYRMSQPQVYPVSQDQQPQSLIQTQDVNIQSQDLDEAELMQQPSPNSCAQIDSLMQNA 524
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu04g01000 524 Gene3D - 300 482 - -
Adu04g01000 524 PANTHER PROTEIN ARGININE N-METHYLTRANSFERASE 348 481 IPR025799 GO:0016274|GO:0018216
Adu04g01000 524 PANTHER PROTEIN ARGININE N-METHYLTRANSFERASE 10 348 IPR025799 GO:0016274|GO:0018216
Adu04g01000 524 Gene3D Vaccinia Virus protein VP39 137 298 IPR029063 -
Adu04g01000 524 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 161 446 IPR029063 -
Adu04g01000 524 Pfam Ribosomal protein L11 methyltransferase (PrmA) 194 267 - -
Adu04g01000 524 PANTHER HISTONE-ARGININE METHYLTRANSFERASE 1.3-RELATED 348 481 - -
Adu04g01000 524 PANTHER HISTONE-ARGININE METHYLTRANSFERASE 1.3-RELATED 10 348 - -
Adu04g01000 524 CDD AdoMet_MTases 197 297 - -
Adu04g01000 524 ProSiteProfiles SAM-dependent methyltransferase PRMT-type domain profile. 151 440 IPR025799 GO:0016274|GO:0018216
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu04g01000 Adu-Chr4 17583022 17588881 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu04g01000 158 421 C2H2 Transcription Factor Family AT3G12270 31.494 1.91e-31 126
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu04g01000 K05931 - gmx:100809620 887.486
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu04g01000 04 17583022 17588881 Adu04g01000 04 17583022 17588881 ECH