Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu04g00996 ATGGGTATCATGACCACCACTCACCGCAAGCGCACCCAAGAATGCATGAACTTCCCCCATTTTCAATCCCACCAGATTCCCCAATCTCCCATTCCCTCTATTTCTCATACTAAGCGACCTAAATTATCACCTTCTATTATACCCACACCTACACCCGCCACCCGACCCCTTTCCACCGCCACCACCGCCACTGGTAACCGGATCTCCCGGTACCCTGAGCCCAAGGGGCCCTTCCGCAGGGAGGTTCACGCTCCTTGCAGGCCCAATAAATTCGTTTTTTCGGGCTCCAGGGTTGCTAGGGTTACCGCATATTCGCAGCGGAACGACGAGCGCATTGGTGGCGACGACACCGGCGACGGCATGGGAAACTTTTTGGCGCGAAGCTACGGGATTGTGAAGCAAGCGGTGTATGATTTCACTGGGAAGGGGAAGAAGGAGGTGGTGGAATTGGACGCTGATGAGCGCGGGCAGGACGAGGCTTCGGAGGATTTGAGCGTTCGGGAGGTTGAGAATGTCGAAATTGGGGGGGAAGGGAGGTCGCTGGTGGCGGACAAGAGGTGGATTAGGAGTGATGCAGTTGTGGTTGAGGTGCCGGAGGTGGAATTCGTAGATGCTAGGGTTGGGGACGGGGGGAAGTCAACGTCGACGGTGGTGGATTCGGAGTTGACTAATAGTGGTTTGAAGATGGTGGCGAATGATGCTGCAGGGATGGGTTTGGCTGCTCTGATCCGTGAGCATGAGCAGAACCCTGAAAATGTTCATCTTTATAAGAAGTTGCTTCTGGCAGCTGGCAGAAGAGACGACAAACTCGGGTGGCTGAGCTTTGAAATTGAGCGGAACGAGAAAAAGATAGCTGGATTTGAATTGTTGCGGCCGAAGAAGGCAGAACCAGTTGAGAAAGTACCACGTGAACCATTTCTCGCACTTACAGAGGAAGAGGAAGATGAGGTTGCAAGTGCCTTTTCAGCCAACCGAAGGAAGATCTTGGTTACACACGATGAATCCAACATTGAGATAAGTGGAGAAAAGTTTCAGTGCCTTAGGCCAGGTGCATGGTTGAACGATGAGGTGATAAATTTGTACCTTGAGTTGCTGAAAGAGAGGGAGAAAAGAGACCCACAGAGGTTTCTTAAATGCCATTTTTTCAATACATTTTTCTACAAAAAGCTAATAAGTGGCAGGAGTGGTTATGATTTCAAATCTGTCAGAAGATGGACTAGCCAAAGGAAATTAGGATATGGTCTAATTGAATGTGATAAAATTTTTGTGCCTATACATAAAGAGATCCACTGGTGCTTGGCTATTATCAATAAGAAAGATCAGAAATTCCAGTATCTTGACTCATTGAAAGGAATGGACAACCAAGTGCTGAAAGTACTGGCTAGATATTATGTGGACGAGGTGAAGGACAAGACTGGTAAAGACCTAGATGTGAGTTCTTGGGAAAAAGAATTCGTTGAAGACCTTCCTGAGCAGGAGAATGGGTATGATTGTGGGGTGTTTATGATCAAATATGCCGACTTCTATAGTAGAGGCCTGGGGCTGTGTTTTAACCAGGAACATATGCCCTACTTCCGCCAGAGGACAGCTAAGGAGATCTTGAGATTGAGAGCTGAATAA 1620 0.4827 MGIMTTTHRKRTQECMNFPHFQSHQIPQSPIPSISHTKRPKLSPSIIPTPTPATRPLSTATTATGNRISRYPEPKGPFRREVHAPCRPNKFVFSGSRVARVTAYSQRNDERIGGDDTGDGMGNFLARSYGIVKQAVYDFTGKGKKEVVELDADERGQDEASEDLSVREVENVEIGGEGRSLVADKRWIRSDAVVVEVPEVEFVDARVGDGGKSTSTVVDSELTNSGLKMVANDAAGMGLAALIREHEQNPENVHLYKKLLLAAGRRDDKLGWLSFEIERNEKKIAGFELLRPKKAEPVEKVPREPFLALTEEEEDEVASAFSANRRKILVTHDESNIEISGEKFQCLRPGAWLNDEVINLYLELLKEREKRDPQRFLKCHFFNTFFYKKLISGRSGYDFKSVRRWTSQRKLGYGLIECDKIFVPIHKEIHWCLAIINKKDQKFQYLDSLKGMDNQVLKVLARYYVDEVKDKTGKDLDVSSWEKEFVEDLPEQENGYDCGVFMIKYADFYSRGLGLCFNQEHMPYFRQRTAKEILRLRAE 539
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu04g00996 539 MobiDBLite consensus disorder prediction 22 44 - -
Adu04g00996 539 Gene3D Adenoviral Proteinase; Chain A 297 536 - -
Adu04g00996 539 PANTHER UBIQUITIN-LIKE-SPECIFIC PROTEASE 1A 59 538 - -
Adu04g00996 539 MobiDBLite consensus disorder prediction 22 61 - -
Adu04g00996 539 ProSiteProfiles Ubiquitin-like protease family profile. 337 509 IPR003653 GO:0006508|GO:0008234
Adu04g00996 539 PANTHER SENTRIN/SUMO-SPECIFIC PROTEASE 59 538 - -
Adu04g00996 539 Pfam Ulp1 protease family, C-terminal catalytic domain 352 533 IPR003653 GO:0006508|GO:0008234
Adu04g00996 539 SUPERFAMILY Cysteine proteinases 305 537 IPR038765 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu04g00996 Adu-Chr4 17287765 17292747 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu04g00996 K08592 - jre:108994812 544.658
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu01g02644 01 95754468 95769823 Adu04g00996 04 17287765 17292747 PCT