Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu04g00988 ATGGACGGCAACAAGGATGAGGCGCTGCGCTGCCTTCGAATAGCTGAGGAAGCGATCGCAGCCGGCAACAAATCCCGCGCCCTCAAATTCATCGGAATCGCTCAGCGGCTCAACCATAACCTCCCCGTCGATGATTTGCTGAACATGTGCGAGCACCTCGATTCTCAGTCCTCTGCGTCTTCTTCTTCTTCAGAACATAAAGGTAACGAAAATCGCGTTAAGAGCAAACCGAACGGTATATCGAAAACTGATGACGAGGGTTTGAACGAGGAGAGGAATTACACGGAGGAGAATGTGAAGTTGATTAGGGAAATTAAATTGAAGAGTGATTACTATGCGATCTTGGGAGTTGAGAAGAGTTGTTCGGTTGAAGAGATTAGAAAGGCTTATAGGAAACTTTCCTTGAAGGTTCATCCGGATAAGAACAAGGCACCAGGTTCCGGAGAGGCCTTTAAGAAGGTCTCAAAAGCATTTAAATGCTTGAGTGATGATAGTTCTAGAAGGCAGTATGATCAGACTGGATTGGTGGATGAATTCGAGTACAATCAGCAGTACAGCGTTCCGCGCCGGAGGAGGAGAACTGCAGCAAGCCGGGATTTCTTCGAGGATGATTTCGATCCGGACGAGATATTCAGGGCCTTTTTTGGACAATCTGATGTGTTTGGGAGGCAACATGTTTACAGGACAAGGGCAACCACCCATGATCATCATCATCAAAGACATGGTTTTCAGGGTGTTGCAGGTGGAACGGGGCTTAATGTTATGCTCCTTGTTCAGTTGTTGCCGTTCTTGATCATTTTGCTGCTTGCTTACCTGCCATTCTCTGAACCTGAGTATTCTCTGTACAAGAATTACTCATACCAGTTTCCCAAGACCATAGAGAATTATGGGATTCAATATTTCGTAAAGTCTCAAGCTTTTGATCGTAACTATCCACAGGGGAGTGCTGCTCGCACTACCATTGAGGACAATGTTATAAAAGATTATAAAAATATGCTTCGGCGTTATTGTCAGATTGAGATTCAGAGGCGGAGTTGGAATAGGAATCTGCCTACTCCTCACTGTGAAAAGTTGCAAAACTTTGGAGTAGTAGCCTGA 1098 0.4526 MDGNKDEALRCLRIAEEAIAAGNKSRALKFIGIAQRLNHNLPVDDLLNMCEHLDSQSSASSSSSEHKGNENRVKSKPNGISKTDDEGLNEERNYTEENVKLIREIKLKSDYYAILGVEKSCSVEEIRKAYRKLSLKVHPDKNKAPGSGEAFKKVSKAFKCLSDDSSRRQYDQTGLVDEFEYNQQYSVPRRRRRTAASRDFFEDDFDPDEIFRAFFGQSDVFGRQHVYRTRATTHDHHHQRHGFQGVAGGTGLNVMLLVQLLPFLIILLLAYLPFSEPEYSLYKNYSYQFPKTIENYGIQYFVKSQAFDRNYPQGSAARTTIEDNVIKDYKNMLRRYCQIEIQRRSWNRNLPTPHCEKLQNFGVVA 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu04g00988 365 MobiDBLite consensus disorder prediction 67 91 - -
Adu04g00988 365 MobiDBLite consensus disorder prediction 54 91 - -
Adu04g00988 365 CDD DnaJ 110 163 IPR001623 -
Adu04g00988 365 Gene3D DnaJ domain 107 228 IPR036869 -
Adu04g00988 365 PRINTS DnaJ domain signature 112 130 IPR001623 -
Adu04g00988 365 PRINTS DnaJ domain signature 130 145 IPR001623 -
Adu04g00988 365 PRINTS DnaJ domain signature 146 166 IPR001623 -
Adu04g00988 365 PANTHER AT29763P-RELATED 1 363 - -
Adu04g00988 365 Pfam DnaJ domain 110 171 IPR001623 -
Adu04g00988 365 ProSiteProfiles dnaJ domain profile. 110 174 IPR001623 -
Adu04g00988 365 SMART dnaj_3 109 166 IPR001623 -
Adu04g00988 365 PANTHER CHAPERONE PROTEIN DNAJ 49 1 363 - -
Adu04g00988 365 SUPERFAMILY Chaperone J-domain 109 222 IPR036869 -
Adu04g00988 365 Pfam Domain of unknown function (DUF1977) 275 344 IPR015399 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu04g00988 Adu-Chr4 17081792 17083315 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu04g00988 4 171 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 27.168 2.92e-08 53.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu04g00988 K09518 - sind:105171531 453.366
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu04g00988 04 17081792 17083315 Adu04g00988 04 17081792 17083315 ECH