Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu04g00971 ATGGTCCCTGAAGAATATAGTACTAAATTTGATGGATCTTCTATTTTGAAGGAGACTGACATTGGGAGGCACGTGAATCAGTTGCGGAAGCATTCCTCCAATGGCGTTCGCAGATTGGTGAAGCTACTTGTGAGGGCACTATTGCTCAACACAATCCCCATCTTGATAGTGTCTCTAACAGTACTAGTACTAAGGGATTCATTCCCCATGAGTTCTATTGTGAATGCACCAGTAACAGCAACATGTGTCATTGTCTATGAGAGAATATTCTGCATGAGATTTGGTCAGATTGATGGTCACATCTTCATTCCCATTCTTGCTGCATCAAATTGGACTCAATGGTATCTTTCATTGTTTGTTTGTGGTTGCATCATTTCTTGGGTGTTTGTTTACGTGAAAGTTCCTAAGACAAAGGGCATGCCATTAGAAGTCATCATCGAGTTCTTCGCCATTGGTGCTAAGCCTGGAGCTGTCCTGCCACCATGGCAAGCTAAAAAGCTCGACGATCATCGTCTTATTTGTGTGGAGTCTGGTGACATTGATCTATCTGAGTTTCAAGAAGAGAACCAGGGTGATGATGGTGATAGAAATGATAATGATAGAGATGACGGGACTGATAATTATTGGATAATACAGGATGAACTTATGTGGGCAGCAACATGGTTATACATGGCTACGAGGAAGCCTGCGTATTTGAAGTACATACAAGAAGAATCGATAAGTGCTAGCGTAACAGAATTTAATTGGGATCTTAAATATGCAGGAGCCCAAATCCTTCTTACCAAGTTGAAGATGGGTATTTGCAACCAGGATGCAGTCAAGCAATTGCAATCCATGATGGAAAATGAACATGCATCAGAAAATGAGATTGACAATGTTTTATCATCATATGTTGCTCTCAAGATCCAAAAAAGTATTTGCAAATGTGCATTTGACCTGATTTTAATCTCTCTTGGACACAAGGAAAATGTGACTGTTGCACAAGTTAAGCAATACTGTGAGATGGAGAGTCATGAAGAGAAGCTGCACAGACAGATGAGGGAGGACAAGATTAGAGAAGCAAAGGATGAAATGAAAAGGAAAGCTAATGAGATTGATAAAAACAAGATTATAAAGAACAGAGGTGATAATTATAAAGGAGGTTTTGGCCCATTACAGTCAATGGGCTCGGGAATATTTGAAAATAGCTTTAATGATACAAGCATCTCCAGCAGTGGAACTGGTTCCAGATTGAGTTCTGATGTTGACTCCTTTTCTACCAAGTCTAAAGATCGGATATAG 1281 0.3997 MVPEEYSTKFDGSSILKETDIGRHVNQLRKHSSNGVRRLVKLLVRALLLNTIPILIVSLTVLVLRDSFPMSSIVNAPVTATCVIVYERIFCMRFGQIDGHIFIPILAASNWTQWYLSLFVCGCIISWVFVYVKVPKTKGMPLEVIIEFFAIGAKPGAVLPPWQAKKLDDHRLICVESGDIDLSEFQEENQGDDGDRNDNDRDDGTDNYWIIQDELMWAATWLYMATRKPAYLKYIQEESISASVTEFNWDLKYAGAQILLTKLKMGICNQDAVKQLQSMMENEHASENEIDNVLSSYVALKIQKSICKCAFDLILISLGHKENVTVAQVKQYCEMESHEEKLHRQMREDKIREAKDEMKRKANEIDKNKIIKNRGDNYKGGFGPLQSMGSGIFENSFNDTSISSSGTGSRLSSDVDSFSTKSKDRI 426
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu04g00971 426 SUPERFAMILY Six-hairpin glycosidases 184 282 IPR008928 GO:0005975
Adu04g00971 426 MobiDBLite consensus disorder prediction 401 426 - -
Adu04g00971 426 Pfam Glycosyl hydrolase family 9 203 297 IPR001701 GO:0004553|GO:0005975
Adu04g00971 426 ProSiteProfiles TFIIS N-terminal domain profile. 1 51 IPR017923 -
Adu04g00971 426 SUPERFAMILY Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 14 45 IPR035441 -
Adu04g00971 426 Coils Coil 344 371 - -
Adu04g00971 426 Gene3D MFS general substrate transporter like domains 99 154 IPR036259 -
Adu04g00971 426 PANTHER S-ACYLTRANSFERASE 309 425 - -
Adu04g00971 426 Pfam TFIIS helical bundle-like domain 15 44 IPR017923 -
Adu04g00971 426 MobiDBLite consensus disorder prediction 401 416 - -
Adu04g00971 426 Gene3D - 180 333 IPR012341 GO:0005975
Adu04g00971 426 PANTHER COATOMER SUBUNIT DELTA 309 425 IPR027059 GO:0006890|GO:0030126
Adu04g00971 426 Gene3D Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 6 46 IPR035441 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu04g00971 Adu-Chr4 16552836 16557426 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu04g00971 45 154 Organic Solute Cotransporters AT4G35300 39.286 3.23e-20 91.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR IWS1 Adu04g00971 Glyco_hydro_9 3.6e-12 CL0059
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu04g00971 K20471 - adu:107468354 233.032