Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu04g00955 ATGAAACCCATTGCTTCTTCTGGACGTGTTCTTCGCGAAGAGGTTGATAACGAGGGGTTCCCCGATTGGTTTTCCTCTTCAGATCGCAAGTTGTTGGCAAAGGATGTGAAGTTTCATGTTCCAAATGTAGTGGTTGCTAAAGATGGTAGTGGAAACTTTAGGACGGTTCAGGATGCAATTAACTCGTATCCAAAGACAAAAAATTTTCAGGAAAGGTACATTATCTATGTTAAGGCGGGGATTTATAAGGAGAATTGTACAGTTCCATCTCATGCAATGAATATTTTCATGTATGGCGATGGCCCTACTAAGACCATTATCACTGCTAGTATGAGCAATGTCACCCATAACCTCAAGACCATGTTTACTGCCACTTTCGCTGGTGCAAAAGGGCACCAAGCAGTTGCACTCAGAAATGTAGGAGATTTTTCAGCTTTTTATAACTGCCACATACATGGTTATCAAGACACTTTGTATGTTCAAGCTAATAGACAATTCTACCGCAACTGCGAAATTGCTGGAACAGTTGACTTTATTTTCGGTACATCCCCCACCATGATCCAAAGAAGCAAGCTCATCGTGAGGATGCCCTTGCCAACTCAATTCAATGTGTTGGTCGCAGATGGCACCGTCGAAAGGAACATGACTACTGGCATTGTGATTCAGGGATGCCAGATTGTTCCAGATCCAATGTTTGACCCTGGATTGTTCCAGATTCAATGGTGGGCCCCTCATGCTACCAATGAGATGAAAAGCTTCTTAGATATTTGTGAGTATGGAAATACCGGACCAGCTGTTTCAGTTCATGGAAGAATCAAGTGGAAGGGATATCGTGGTATAATAACCAAGAATGAAGCCATGCGATTCACTGTTGGTGAATTCCTCAAGGGTGGACCTAACAATAGTGCTGACCAATGGTTGAACGCTCTTAGTGTTCCTTTTGAAAGTGGTTTTGTAAGACCATAA 966 0.4255 MKPIASSGRVLREEVDNEGFPDWFSSSDRKLLAKDVKFHVPNVVVAKDGSGNFRTVQDAINSYPKTKNFQERYIIYVKAGIYKENCTVPSHAMNIFMYGDGPTKTIITASMSNVTHNLKTMFTATFAGAKGHQAVALRNVGDFSAFYNCHIHGYQDTLYVQANRQFYRNCEIAGTVDFIFGTSPTMIQRSKLIVRMPLPTQFNVLVADGTVERNMTTGIVIQGCQIVPDPMFDPGLFQIQWWAPHATNEMKSFLDICEYGNTGPAVSVHGRIKWKGYRGIITKNEAMRFTVGEFLKGGPNNSADQWLNALSVPFESGFVRP 321
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu04g00955 321 PANTHER PECTINESTERASE 14 237 - -
Adu04g00955 321 PANTHER PECTINESTERASE 238 318 - -
Adu04g00955 321 SUPERFAMILY Pectin lyase-like 42 309 IPR011050 -
Adu04g00955 321 Pfam Pectinesterase 241 297 IPR000070 GO:0030599|GO:0042545
Adu04g00955 321 Pfam Pectinesterase 42 232 IPR000070 GO:0030599|GO:0042545
Adu04g00955 321 PANTHER PECTINESTERASE 14 237 - -
Adu04g00955 321 PANTHER PECTINESTERASE 238 318 - -
Adu04g00955 321 Gene3D - 38 318 IPR012334 -
Adu04g00955 321 ProSitePatterns Pectinesterase signature 2. 172 181 IPR033131 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu04g00955 Adu-Chr4 16139178 16141055 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu04g00955 23 318 Carbohydrate Esterase AT4G33230 38.596 1.54e-69 225
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu04g00955 K01051 - gmx:100775246 339.347