Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu04g00954 ATGTGCCGCAACACACAAGAGGATCAAAACCTCTGTCGCGAGGTTCTAAGCCAAGTTGATGGGTCCTCTTCTTCTGACCCGAAAGCATACATCGATGCCGCCGTGAATGATATCAGAGACGGCGTCACCACCGCCTTAAAGATGATGACGATTAAGGAGGAGTTCTCCAAAGATGACAACGGAATCAAGATGGCCATTGATGGTTGCAAAGAAGTTATGGAATCCGCATTGAGCAGCCTCGACCTTTTCAGCAATGTGCTTCGCAGCAATCACGACATTACCTCCTTGCAATCGCAAACTCCCGACCTCAAGAACTGGCTTAGTGCCGTTATCTCATATCAGCAATCTTGTGTTGACATTTTTGAGGATCAAAATGAAGGAGAGAGAAAAATCAAAGAACAACTACAAAGCTAG 414 0.4589 MCRNTQEDQNLCREVLSQVDGSSSSDPKAYIDAAVNDIRDGVTTALKMMTIKEEFSKDDNGIKMAIDGCKEVMESALSSLDLFSNVLRSNHDITSLQSQTPDLKNWLSAVISYQQSCVDIFEDQNEGERKIKEQLQS 137
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu04g00954 137 Gene3D Invertase/pectin methylesterase inhibitor family protein 1 137 IPR035513 -
Adu04g00954 137 CDD PMEI-like_3 1 130 - -
Adu04g00954 137 PANTHER PECTINESTERASE 1 135 - -
Adu04g00954 137 PANTHER PECTINESTERASE 1 135 - -
Adu04g00954 137 Pfam Plant invertase/pectin methylesterase inhibitor 1 132 IPR006501 GO:0004857
Adu04g00954 137 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 1 126 IPR035513 -
Adu04g00954 137 TIGRFAM PME_inhib: pectinesterase inhibitor domain 2 128 IPR006501 GO:0004857
Adu04g00954 137 SMART PMEI_2 1 135 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu04g00954 Adu-Chr4 16138671 16139084 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu04g00954 1 125 Carbohydrate Esterase AT2G26450 32.576 8.68e-10 53.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu04g00954 - K01051 ahf:112794701 263.848