Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu04g00951 ATGAGCTTTGAAATTAGCTTTTCAGGAGGTGGAGGTGGAGGTGGAGGTGGTAGTGATGTCTGTCAAGAGAAAACCAGAGAGAGGAGACATGCTGGTTCATGTTGCAAGGCAGGGACAAAGCCTGGTCATGAAAAGTTGCGGAGGGAGAGACTCAATGAAAGGTTTTGTGACTTGAGGGTTGTTTTAGAACCTGGGAGACCTGCGAAAGCCGATAAAATGACTATACTTATGATGCTATCAGAGTTTTAA 249 0.4498 MSFEISFSGGGGGGGGGSDVCQEKTRERRHAGSCCKAGTKPGHEKLRRERLNERFCDLRVVLEPGRPAKADKMTILMMLSEF 82
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu04g00951 82 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 35 82 IPR011598 GO:0046983
Adu04g00951 82 MobiDBLite consensus disorder prediction 1 36 - -
Adu04g00951 82 PANTHER BHLH TRANSCRIPTION FACTOR 22 76 IPR044818 GO:0003700|GO:0006355|GO:0046983|GO:0055072
Adu04g00951 82 Gene3D - 35 82 IPR036638 GO:0046983
Adu04g00951 82 MobiDBLite consensus disorder prediction 21 36 - -
Adu04g00951 82 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 36 78 IPR036638 GO:0046983
Adu04g00951 82 Pfam Helix-loop-helix DNA-binding domain 39 78 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu04g00951 Adu-Chr4 16100150 16101373 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu04g00951 28 76 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G23210 63.265 4.08e-14 63.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Adu04g00951 HLH 4.9e-06 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu04g00951 - - adu:110279904 162.54