Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu04g00950 ATGGCGAGGACAGAAGCAGGGTTCACGAAGAGCACAGAGATGATGAGGAGGAGAAGAGTGGCGGCGGCTGAAACGGAGAGTGAGAGACACTGCAACAATGAGAAGAAGCCATCGGGGGTTGCCACCGGGGTCATCATGGTCGTTAATAACAAAAAAAGCAATGGCGCTGAAGTGCAAAACACTAAAGAAAGATTCACAAGTCTCATGTGCCGCAACACACAAGAGGATCAAAACCTCTGTCGCGAGGTTCTAAGCCAAGTTGATGGTTCCTCTTCTTCCGACCCGAAAGCATACATCGACGCTGCCGTGAACGATATCAGAGACGGTGTCACCACCGCCCTAAAGATGATGACAACTGAGGAGGAGTTCTCCAAAGATAACAACGGAATCAAGATGGCCATTGATGGTTGCAAAGAAGTCATGGAGTCCGCATTGAGCACCCTTGACCTTTTCAGCAACGTGCTTCGCAGTAATCACGACATTAACTTCGTGCAAACGCAAAGCCCCGACCTCAGAAACTGGCTTAGCACTGTTATCTCATATCAGCAATCTTGTGTTGACATTTTTGAGGATCAAAATGAAGGAGAGAGAAAAATCAAAGAACAACTACAAAGCAAGAGTTTGGATCGTGTTGAGAAGGTTTCCATCATAACTCTCGATATTGTTACTGGTTTGGCTAAAATCATTGAAGATCTTGGTCTGCATGTGGAAATAAAACCCATTGCTTCTTTTGGGCGTGTTCTTCGCGAAGAGGTTGATAACGAGGGGTTTCCCGATTGGTTTTCCTCTTCAGATCGCAAGCTGTTGGTGAAGGATGTGAAGTTTCATATCCCAAATGTAGTGGTTGCTAAAGATGGTAGTGGAAACTTTAGGACGGTTCAGGATGCAATTAACTCGTATCCAAAGGCAAAGAATTTTCAGGGAAGGTACATTATCTATGTTAAGGCGGGGATCTATAAGGAGAATTGTACGGTTCCATCTCATGCAATGAACGTTTTCATGTATGGAGATGGCCCTACTAAGACCATTATAACTGCTAGTATGAGCAATGTCACCCACAACCTCAAGACCATGTTTACTGCCACTTTCGTGAATAAAGCGGGAATGTTTCTTGCGAAGGACATGAGATTCGAGAACGCAGCTGGTGCAGAAGGACACCAAGCAGTTGCACTCAGAAATGTGGGAGATTTTTCAGCTTTCTATAACTGCCACATACATGGTTATCAAGACACCTTATATGTTCAAGCCAACAGACAATTCTATCGCAACTGTGAAATCGCTGGGACAGTTGACTTTATTTTCGGTACATCTCCCGCTGTGATCCAAAGAAGCAAGCTCATTGTGAGAAAGCCCTTGCCAACTCAGTTCAATGTGTTGATCGCAGATGGCACCGTCCAGAGGAACATGACTACTGGCATTGTGATTCAGGGATGCCAGATTGTTCCAGATCCAATGTTTGACCCTGTCAAGTACCAAATGAAGACTTATTTGGGTAGGCCATGGAAGGAAGGATCGAGAGTAGTAATCATGGAATCATATCTGGGTGACTGGATTAATCTGGAAGGGTGGGCCCCTCATGATGGCAATGAAATGAAAGGCTTCTTAGATATTTGTGAGTATGGAAATACCGGACCTGCTGCTTTAGTTCATGGAAGAATTAAGTGGAAAGGGTATCGTGGTATGATAACTAAGAATGAAGCCATGCGATTCACTGTTGCTGAATTCCTCAAGGGTGGACCTAACAATGGTGCTGACAGATGGTTGAACGCTCTTGGTGTTCCTTTTGACAGTGATTTTCTAAGACCATAA 1809 0.4461 MARTEAGFTKSTEMMRRRRVAAAETESERHCNNEKKPSGVATGVIMVVNNKKSNGAEVQNTKERFTSLMCRNTQEDQNLCREVLSQVDGSSSSDPKAYIDAAVNDIRDGVTTALKMMTTEEEFSKDNNGIKMAIDGCKEVMESALSTLDLFSNVLRSNHDINFVQTQSPDLRNWLSTVISYQQSCVDIFEDQNEGERKIKEQLQSKSLDRVEKVSIITLDIVTGLAKIIEDLGLHVEIKPIASFGRVLREEVDNEGFPDWFSSSDRKLLVKDVKFHIPNVVVAKDGSGNFRTVQDAINSYPKAKNFQGRYIIYVKAGIYKENCTVPSHAMNVFMYGDGPTKTIITASMSNVTHNLKTMFTATFVNKAGMFLAKDMRFENAAGAEGHQAVALRNVGDFSAFYNCHIHGYQDTLYVQANRQFYRNCEIAGTVDFIFGTSPAVIQRSKLIVRKPLPTQFNVLIADGTVQRNMTTGIVIQGCQIVPDPMFDPVKYQMKTYLGRPWKEGSRVVIMESYLGDWINLEGWAPHDGNEMKGFLDICEYGNTGPAALVHGRIKWKGYRGMITKNEAMRFTVAEFLKGGPNNGADRWLNALGVPFDSDFLRP 602
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu04g00950 602 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 69 219 IPR035513 -
Adu04g00950 602 SUPERFAMILY Pectin lyase-like 279 595 IPR011050 -
Adu04g00950 602 Gene3D Invertase/pectin methylesterase inhibitor family protein 63 226 IPR035513 -
Adu04g00950 602 TIGRFAM PME_inhib: pectinesterase inhibitor domain 59 223 IPR006501 GO:0004857
Adu04g00950 602 CDD PMEI-like_3 68 227 - -
Adu04g00950 602 PANTHER PECTINESTERASE 39 595 - -
Adu04g00950 602 PANTHER PECTINESTERASE 39 595 - -
Adu04g00950 602 ProSitePatterns Pectinesterase signature 2. 426 435 IPR033131 -
Adu04g00950 602 SMART PMEI_2 61 221 IPR006501 GO:0004857
Adu04g00950 602 Pfam Pectinesterase 279 578 IPR000070 GO:0030599|GO:0042545
Adu04g00950 602 Gene3D - 276 599 IPR012334 -
Adu04g00950 602 Pfam Plant invertase/pectin methylesterase inhibitor 69 221 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu04g00950 Adu-Chr4 15959588 15962901 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu04g00950 90 594 Carbohydrate Esterase AT4G33230 39.139 4.53e-109 338
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu04g00950 K01051 - gmx:100815015 586.26