Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu04g00946 ATGGATATGGACCACAAGGTCGGCAGTTCACAATTTTATTTCGACTTTGCAGATCTTATCTGGGATGACGACCCTCCGCATTTTCAGCACCATACCCCAAAGGATCAGGTGCCGGAGACCCAGCCCCAGATGGACGTTGCACTGGGATATCGCCCAGATATGGAGGATATGCAGCGGTACCAGCCCCATATGTCTGACTCTCAGGGGTATCAGTTCCAGTTTCATATAGACCTAAATGAGCCTGCTAGCAGTCCGTATGACAGTCGGTTGGGTATGGGAGGGACGCCTCCATCTGCATATGGCGTGGGCATACCCGTCGATCCTCCAGCACAACAGCGCCAGAGGCTAGCTAGAGTGAGACGGGCCGCTCGATATGGTACAGGGTCGCATCTCCTAGGCGCATTTGGACATGACTCTCACGAGGAGGATGAGGATAGGCAGGAGTCGCAGCTCAATTTATGTGCACCCTTTTTCTTCCCTATCTTCTCTAACAACAATCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTTATGGGCTGAGCTCGATCCTTTCTCCGACTTCCTTGGTTTTGACGCCGCCACGGTCACCGCCAACAACTCCAACAACAAGGATCAGCCACCAATTCCTCAAATCCCAGATAACAACAACAACAACAACAAAGTGGTAGCATGTGACAAGGTACTAGGAAAGGAAAAAACGGTTGTTGGTGGTGGCGCAGAAGATAAGAAGACGAAAGGTCCCAATCCACGTCAGAGGGTCCGTAAGAACGTCTACAGAGGAATCAGACAGAGGCCCTGGGGCAAGTGGGCTGCAGAGATAAGGGACCCACACAAAGGAGTCCGTGTCTGGCTCGGCACGTTCAACACTGCCGAAGAGGCCGCTAGAGCCTACGACGACGCTGCCAGACGCATCCGCGGCAACAAAGCCAAGCTCAATTTTCCGGATGCTTCTGAGGACAACGTCGTGGTAGCCCCTCCATTGGCCAAGAAGCAGTGTCTTGGCAATGAGATGCTGTCTCAGGTCGAAATTCAGTCACTTGTGCCACCACTTATCTCTACCGTGCAAACTGGCAGCGACAATGGAAGCATAGAGGGATTGGATTCTGACCTATCACAGCAGATCTCGGATCTTGAATGGTTTCTCGGATCGGAGAATGAGCAACCGTTGCAAATAGGTGGTGATGCCGTTTGGAACGACGTTAACAACTACAACGATAACAACAATAATATGGACCTGTGGATGCTGGACGACGTCGTTATGCCCAACCGTTACATGGTGTAA 1296 0.5154 MDMDHKVGSSQFYFDFADLIWDDDPPHFQHHTPKDQVPETQPQMDVALGYRPDMEDMQRYQPHMSDSQGYQFQFHIDLNEPASSPYDSRLGMGGTPPSAYGVGIPVDPPAQQRQRLARVRRAARYGTGSHLLGAFGHDSHEEDEDRQESQLNLCAPFFFPIFSNNNLSLSLSLSLSLSLSLLWAELDPFSDFLGFDAATVTANNSNNKDQPPIPQIPDNNNNNNKVVACDKVLGKEKTVVGGGAEDKKTKGPNPRQRVRKNVYRGIRQRPWGKWAAEIRDPHKGVRVWLGTFNTAEEAARAYDDAARRIRGNKAKLNFPDASEDNVVVAPPLAKKQCLGNEMLSQVEIQSLVPPLISTVQTGSDNGSIEGLDSDLSQQISDLEWFLGSENEQPLQIGGDAVWNDVNNYNDNNNNMDLWMLDDVVMPNRYMV 431
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu04g00946 431 ProSiteProfiles AP2/ERF domain profile. 262 319 IPR001471 GO:0003700|GO:0006355
Adu04g00946 431 SMART rav1_2 262 325 IPR001471 GO:0003700|GO:0006355
Adu04g00946 431 PANTHER DNA-BINDING DOMAIN 244 329 IPR044808 GO:0003700|GO:0009873
Adu04g00946 431 CDD AP2 263 321 IPR001471 GO:0003700|GO:0006355
Adu04g00946 431 Pfam AP2 domain 262 311 IPR001471 GO:0003700|GO:0006355
Adu04g00946 431 SUPERFAMILY DNA-binding domain 262 320 IPR016177 GO:0003677
Adu04g00946 431 PANTHER EREBP TRANSCRIPTION FACTOR 244 329 - -
Adu04g00946 431 PRINTS Ethylene responsive element binding protein signature 263 274 IPR001471 GO:0003700|GO:0006355
Adu04g00946 431 PRINTS Ethylene responsive element binding protein signature 285 301 IPR001471 GO:0003700|GO:0006355
Adu04g00946 431 MobiDBLite consensus disorder prediction 203 222 - -
Adu04g00946 431 Gene3D AP2/ERF domain 262 320 IPR036955 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu04g00946 Adu-Chr4 15757158 15760230 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu04g00946 177 424 AP2-EREBP Transcription Factor Family AT3G16770 40.959 6.59e-43 149
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Adu04g00946 AP2 8e-14 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu04g00946 K09286 - gmx:100817253 195.282
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu04g00946 04 15757158 15760230 Adu04g00946 04 15757158 15760230 ECH