Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu04g00935 ATGTTAAACATGATGAACAATAATAGGAATAACAACCCTGCACCACTTTGCCCTCCATTACAAGTCCAATATGATTATCATCATGGATATGATTATTCTTCCTTATTGTTCTCCTCATCATACTCGTTGGCGGCACCAGGTAACATTAGTGCCGCCACTGCAGCTCCTAACTCAGCATCCTCTCCTCACTCTGGCACCGGAAAGTACCGAGGTACGCGGTGTCGGAGCGGAAAGTGGGTGTCAGAGATAAGAGAGCCACGGAAGTCAAACCGCATATGGCTTGGGACATACCCCACACCGGAGATGGCTGCCACCGCTTACGATGTAGCGGCTCTTGCATTAAGAGGTCCTAATGCCTATCTCAACTTTCCCAATTTCATGCTCGCTTACCCTATTCCTGCCTCCTTGTCCGCCCCTGATATTCGCGCTGCCGCGGCCGCTGCGGCCGAGGCGAGGCTTGTTACATCACCACCGCCACCTCCACTGCCAATACCACCGGAAAACCCTTCAGAGATTCTGGAGGAATATTTCGATGAAGAGGAGGTATGGAATATGCCGAGCTTGATCGAAGACATGGCCAGGGGAATGCTTATGAGTCCCCCAAGAATGGTGGAGTCCTTCTCCTCTGAAGACTTTGCCGAGTGCTATTCGGATCTTTATAGTACTCTTTGGAGTACTTGTAATGAGCGGAGCGGCGCTGTTACGTGGATTTGGCGTGGCACGACGATTGTGCAGGGTGAAGGAGATAATGGTGTCGGAGCGAGAGAATTTTCACACGGCGACTTCGTGATGAGACTGCATCTTGACGAAAAGGTTGGAAGAGAGGATGTCGCATTGTGA 840 0.5071 MLNMMNNNRNNNPAPLCPPLQVQYDYHHGYDYSSLLFSSSYSLAAPGNISAATAAPNSASSPHSGTGKYRGTRCRSGKWVSEIREPRKSNRIWLGTYPTPEMAATAYDVAALALRGPNAYLNFPNFMLAYPIPASLSAPDIRAAAAAAAEARLVTSPPPPPLPIPPENPSEILEEYFDEEEVWNMPSLIEDMARGMLMSPPRMVESFSSEDFAECYSDLYSTLWSTCNERSGAVTWIWRGTTIVQGEGDNGVGAREFSHGDFVMRLHLDEKVGREDVAL 279
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu04g00935 279 MobiDBLite consensus disorder prediction 52 73 - -
Adu04g00935 279 MobiDBLite consensus disorder prediction 52 67 - -
Adu04g00935 279 SMART rav1_2 68 130 IPR001471 GO:0003700|GO:0006355
Adu04g00935 279 CDD AP2 68 125 IPR001471 GO:0003700|GO:0006355
Adu04g00935 279 ProSiteProfiles AP2/ERF domain profile. 68 124 IPR001471 GO:0003700|GO:0006355
Adu04g00935 279 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 58 225 - -
Adu04g00935 279 Pfam AP2 domain 69 116 IPR001471 GO:0003700|GO:0006355
Adu04g00935 279 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF026 58 225 - -
Adu04g00935 279 Gene3D AP2/ERF domain 68 125 IPR036955 GO:0003700|GO:0006355
Adu04g00935 279 SUPERFAMILY DNA-binding domain 68 124 IPR016177 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu04g00935 Adu-Chr4 15195869 15198074 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu04g00935 69 211 AP2-EREBP Transcription Factor Family AT5G52020 55.556 2.55e-40 138
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Adu04g00935 AP2 9.9e-10 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu04g00935 - - adu:107483526 380.948