Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu04g00901 ATGTCAGAAGGAACCAGTCTGGTGCTGGAATCGTCCGAGAATTGCACAGATTTGTCTCAGGATGAGATTGGCACGATTGAGGAAACACCAGAGGAAACAATTTTATCAAGACAGACTTCTGTCAACCTTGTTCCTTTTATTGGTCAGAGATTTGTTTCTCAAGAAGCTGCTTATGAATTCTATTGCAGTTTTGCTAAGCAGTGTGGCTTTTCTATTCGGCGACACCGCACTCGAGGGAAGGACGGTGTTGGTCGCGGAGTCACAAGGAGGGATTTTACTTGCCATCGTGGTGGATACCCCCAGGTCAAACCTTCTGATGATGGGAAGATGCAAAGGAACCGCAAATCATCTCGTTGTGGTTGCCAAGCATACTTGCGTATTGTTAAAAAGTCGGATTTTGATGTCCCTGAGTGGCGTGTTACTGGCTTTAGCAATGTCCACAATCACGAGTTGTTAAAATCTAATGAGGTGCGGCTTCTTCCGGCATACTGCACAATATCTCCTGATGACAAGAGCCGCATATGCATGTTTGCTAAAGCAGGGATGTCAGTGAGGCAAATGTTAAGATTGATGGAACTAGAGAAAGGCATCAAAGTCGGTTGCCTTCCTTTTACGGAAATGGATGTGAGAAACCTGTTGCAGTCTTTCAGAAATGTTGAAAGAGACAATGATGCCATTGATCTAATTGCTATGTGCAAGAGATTAAAAGATGAAAATCCAAATTTCAAGTATGAATTCAAGATAGACAGTAATAACAGGCTGGAGCACATTGCATGGTCTTACAGCTCATCTGTTCAATCGTACGAGTCATTTGGAGATGCTGTGGTTTTTGACACCACACACCGAGTAGACGCCTATGACATGCTGTTGGGAATCTGGCTTGGAGTGGACAATCATGGGATGACTTGTTTCTTTGGTTGCACACTTCTACGGGATGAAAATATGCAGTCTTTTTCATGGGCTTTAAAGGCTTTCATGGGCTTCATGAAAGGAAAATCTCCGCAAACAATATTAACTGATCATAACATGTGGCTGAAAGAAGCTATTGCTGTTGAAATGCCAGAAACAAAACATGCCTTTTGTATATGGCATATTCTTTCTAAGTTGTCTGACTGGTTTTCTGTTCTACTTGGATCTCATTATGACGAGTGGAAAGCTGACTTCCTCCAGCTCTACAATTTGGAACTGATGGAAGATTTCGAAGAAGGGTGGAGGCAAATGATTGATAAATATCGACTCCACACGAACAAACATATTATTAGCCTACATTCATTAAGGATGTTTTGGGCTCTACCATTCTTGAGGCGTTACTTTTTTGCAGGATTGACCAGCACAAGTCAATCCGAGTCCATTAATGCTTTCATCCAACGGTTCTTGAGCGCTCAATCTCAATTGGACCACTTTGTTGAGCAAGTGGCAGATATTGTTGATTTTAACGACCGGGTTGGATTGAAGCAAAAAATGCAACGGAAAGCGCAGAAAGTGTGCCTCAAAACAGGCTCGCCTGTCGAATCTCATGCTGCCACTGTCCTTACACCTTATGCCTTAAGTAAACTCCAGGATGAGCTAGTTTTGGCGCCGCAGTATGCATCCTTTCTGGTGGATGAAGGTTGCTTCCAGGTCAGACATCACACTCAGACAGACGGAGGCTGCAAAGTATTTTGGGTTCCTTGTCAAGCGCACATTACCTGCAGCTGCCACCTGTTCGAGTTTTCAGGAACCTTATGCAGACATGTTCTACGTGTCATGTCGACCAATAACTGTTTTCACATCCCCGACCAATACCTACCCACCCGTTGGAGAGGTGGTGGTTTGTCTTCTGTCAACCAGTTTCGGGGCGTAACAACAAGGGATCAGCCTGAAAGGATGCAATTTTTGGAATCCATGGTTTCAACGCTTATAATGGAATCCATTGAAACAGAGGAACGCCTTGATGTTGCTTGCGAGCAAATGTCTGTGGCGCTGTCACGTATCAAAGCCCTTCCAAGGCCGCCGGCACATGGGGTGAATGACATCACATATAGTTATTCGTCGGATTCATTGATCCTACCAGAGGTAGAAGATACTGATGGAATAATTCATGGTTTTGCAAACCCCCACGATAGTATTGCCTTAGGAAAGCTAAAGGAGAGAAGGGCGAGGGATGTCGTTGATGTCACGAGGAAGCGTAGGCAGTTTCCGGGGCCGTTGTGTGGGCAATATGTGCATGATCCTTCCGATTGCTCAATAATGGCAGGTGATAATCTAGGTGGAGATGGATTAGGGTATTTGTAG 2274 0.4442 MSEGTSLVLESSENCTDLSQDEIGTIEETPEETILSRQTSVNLVPFIGQRFVSQEAAYEFYCSFAKQCGFSIRRHRTRGKDGVGRGVTRRDFTCHRGGYPQVKPSDDGKMQRNRKSSRCGCQAYLRIVKKSDFDVPEWRVTGFSNVHNHELLKSNEVRLLPAYCTISPDDKSRICMFAKAGMSVRQMLRLMELEKGIKVGCLPFTEMDVRNLLQSFRNVERDNDAIDLIAMCKRLKDENPNFKYEFKIDSNNRLEHIAWSYSSSVQSYESFGDAVVFDTTHRVDAYDMLLGIWLGVDNHGMTCFFGCTLLRDENMQSFSWALKAFMGFMKGKSPQTILTDHNMWLKEAIAVEMPETKHAFCIWHILSKLSDWFSVLLGSHYDEWKADFLQLYNLELMEDFEEGWRQMIDKYRLHTNKHIISLHSLRMFWALPFLRRYFFAGLTSTSQSESINAFIQRFLSAQSQLDHFVEQVADIVDFNDRVGLKQKMQRKAQKVCLKTGSPVESHAATVLTPYALSKLQDELVLAPQYASFLVDEGCFQVRHHTQTDGGCKVFWVPCQAHITCSCHLFEFSGTLCRHVLRVMSTNNCFHIPDQYLPTRWRGGGLSSVNQFRGVTTRDQPERMQFLESMVSTLIMESIETEERLDVACEQMSVALSRIKALPRPPAHGVNDITYSYSSDSLILPEVEDTDGIIHGFANPHDSIALGKLKERRARDVVDVTRKRRQFPGPLCGQYVHDPSDCSIMAGDNLGGDGLGYL 757
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu04g00901 757 ProSiteProfiles Zinc finger SWIM-type profile. 554 587 IPR007527 GO:0008270
Adu04g00901 757 Pfam FAR1 DNA-binding domain 59 152 IPR004330 -
Adu04g00901 757 SMART 26again6 562 589 IPR006564 GO:0008270
Adu04g00901 757 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 8 737 IPR031052 GO:0006355
Adu04g00901 757 Pfam MULE transposase domain 275 367 IPR018289 -
Adu04g00901 757 PANTHER FAR1 DNA BINDING DOMAIN, ZINC FINGER, SWIM-TYPE, MULE TRANSPOSASE DOMAIN, FHY3/FAR1 FAMILY-RELATED 8 737 - -
Adu04g00901 757 Pfam SWIM zinc finger 561 584 IPR007527 GO:0008270
Adu04g00901 757 Coils Coil 757 757 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu04g00901 Adu-Chr4 14144045 14148073 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Adu04g00901 MULE 3e-21 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu04g00901 - - gmx:100778434 1336.63
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu04g00901 04 14144045 14148073 Adu04g00901 04 14144045 14148073 ECH