Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu04g00887 ATGGCGGAATATTTTAGAGATGTTAATGAACAAGACGTGCTTCTATTTATCGACAATATCTTCCGATTCGTCCAAGCGGGATCCGAAGTGTCAGCCTTATTGGGTCGAATGCCTTCCGCTGTAGGTTATCAACCGACCCTTAGTACCGAAATGGGTTCTTTACAAGAAAGAATTACTTCTACCAAAGAAGGGTCTATAACTTCTATTCAAGCAGTTTATGTACCCGCAGACGATTTGACCGACCCTGCCCCTGCTACGACATTTGCACATTTGGATGCTACGACCGTACTATCAAGAGGATTGGCTGCCAAAGGTATCTATCCAGCTGGAGATCCTTTAGATTCAACGTCAACTATGCTCCAACCTCGGATTGTTGGTGAAGAACATTATGAAACTGCGCAAAGAGTTAAACAAACTTTACAGCGTTACAAAGAACTTCAGGACATTATAGCTATCCTTGGGTTGGACGAATTATCCGAAGAGCATCGCTTAACTGTAGCAAGAGCACGGAAAATTGAGCGTTTCTTATCACAGCCTTTTTTCGTAGTAGAAGTATTTACCGGTTCGCCAGGAAAATATCCGGCACCGAAGCAGGCAACTGGCACCAGCACCGTCTCATTCAACGTTGAACGGGTCTCACCTCTGTTTGACTGTTTCTCTTCTTCTGCCTTTGGTCTTCTCCCCCGTCATCTTCAGTTCTTCACCGTCGCTGACTCATTGTATCAAGCTTTCATTGTATCAAGCTTATCAATCAACTCTACAATTTCTGTCATAGTGTGGGACATATCTGAATCTAGTTCCAGCACAAGCAGAACAAGCAGTAGCCCCTGTTCTAGTTCTCTGTGCCAGGTCTGTGCTGGTTGTTCTGGGAATTGTATCAGAATCTCAGGTTACAAGTCAGGTACAAACTAG 912 0.4419 MAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERITSTKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAGDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEEHRLTVARARKIERFLSQPFFVVEVFTGSPGKYPAPKQATGTSTVSFNVERVSPLFDCFSSSAFGLLPRHLQFFTVADSLYQAFIVSSLSINSTISVIVWDISESSSSTSRTSSSPCSSSLCQVCAGCSGNCIRISGYKSGTN 303
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu04g00887 303 Pfam ATP synthase alpha/beta family, nucleotide-binding domain 1 117 IPR000194 GO:0005524
Adu04g00887 303 PANTHER F0F1-TYPE ATP SYNTHASE, BETA SUBUNIT 1 198 - -
Adu04g00887 303 Gene3D - 120 203 IPR024034 -
Adu04g00887 303 SUPERFAMILY C-terminal domain of alpha and beta subunits of F1 ATP synthase 120 195 - -
Adu04g00887 303 PANTHER ATP SYNTHASE 1 198 - -
Adu04g00887 303 CDD ATP-synt_F1_beta_C 124 193 - -
Adu04g00887 303 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1 122 IPR027417 -
Adu04g00887 303 Gene3D - 1 117 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu04g00887 Adu-Chr4 13914915 13918393 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu04g00887 1 181 Primary Pumps ATPases(2) AT1G78900 28.934 1.23e-15 75.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu04g00887 K02112 - csin:114305725 370.548