Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu04g00882 ATGAATGAACCGCCTAGAGCACGTATGAGAGTTGGTTTAACTGCCCTAAACATGGCGGAATATTTCAGAGATGTTAATGAACTAGACGTGCTTCTATTTATCGACAATATCTTCCGATTCGTCCAAGCGGGATCCGAAGTGTCAGCCTTATTGGGTCGAATGCCTTCCGCTGTAGGTTATCAACCGACCCTTAGTACCGAAATGGGTTCTTTACAAGAAAGAATTACTTCTACCAAAGAAGGGTCTATAACTTCTATTCAAGCAGTTTATGTACCCACAGATGATTTGACCGACCCTGCTCCTGCTACGACATTTGCACATTTGGATGCTACGACCGTACTATCAAGAGGATTGGCTGCCAAAGGTATCTATCCAGCTGTAGATCCTTTAGATTCAACGTCAACTATGCTCCAACCTCAGATTGTTGGTGAAGAACATTATGAAACTGCGCAAAGAGTTAAACAAACTTTACAGCATTACAAAGAACTTCAGGACATTATAGCTATCCTTGGGTTGGACGAATTATCCGAAGAGGATCGCTTAACTATAGCAAGAGCACGAAAAATTGAGCGTTTCTTATCACAGCCTTTTTTCGTAGCAGAAGTATTTACCGGTTCGCCAGGAAAATATGTAGGTCTAGCAGAAACAATTAGAGGGTTTAAATTGATTCTTTCTGGAGAATTAGACGGTCTTCCCGAGCAAGCCTTTTATTTGGTGGCTGTAGATATAGGTATCTTGAGAATACGCCTTAATGACCAATGGGTAACAATGGCTCTGATGGGTGGTTTTGCTAGAATAGGCAATAATAAGATCACCATTTTAGTAAATGATGCCGAGAAGAGTAGTGACATTGATCCAGAAGAAGCTAAACAAACTCTTGAAATAGCAGAAGCTAACTTGAGTAAAGCTGAAGGCAAGAGACAACTAATCGAGGCAAATCTATCACTAGCATAA 954 0.4088 MNEPPRARMRVGLTALNMAEYFRDVNELDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERITSTKEGSITSIQAVYVPTDDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPQIVGEEHYETAQRVKQTLQHYKELQDIIAILGLDELSEEDRLTIARARKIERFLSQPFFVAEVFTGSPGKYVGLAETIRGFKLILSGELDGLPEQAFYLVAVDIGILRIRLNDQWVTMALMGGFARIGNNKITILVNDAEKSSDIDPEEAKQTLEIAEANLSKAEGKRQLIEANLSLA 317
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu04g00882 317 SUPERFAMILY C-terminal domain of alpha and beta subunits of F1 ATP synthase 137 239 - -
Adu04g00882 317 Gene3D - 1 134 IPR027417 -
Adu04g00882 317 Coils Coil 293 317 - -
Adu04g00882 317 PANTHER F0F1-TYPE ATP SYNTHASE, BETA SUBUNIT 1 242 - -
Adu04g00882 317 Gene3D - 286 317 - -
Adu04g00882 317 TIGRFAM atpD: ATP synthase F1, beta subunit 1 240 IPR005722 GO:0015986|GO:0045261|GO:0046933
Adu04g00882 317 Gene3D - 137 243 IPR024034 -
Adu04g00882 317 Hamap ATP synthase epsilon chain [atpC]. 198 316 IPR001469 GO:0015986|GO:0045261|GO:0046933
Adu04g00882 317 ProSitePatterns ATP synthase alpha and beta subunits signature. 125 134 IPR020003 GO:0005524
Adu04g00882 317 Pfam ATP synthase, Delta/Epsilon chain, beta-sandwich domain 225 278 IPR020546 GO:0015986
Adu04g00882 317 SUPERFAMILY Epsilon subunit of F1F0-ATP synthase N-terminal domain 225 279 IPR036771 -
Adu04g00882 317 CDD ATP-synt_F1_beta_C 141 239 - -
Adu04g00882 317 PANTHER ATP SYNTHASE 1 242 - -
Adu04g00882 317 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1 139 IPR027417 -
Adu04g00882 317 CDD F1-ATPase_delta 231 317 IPR001469 GO:0015986|GO:0045261|GO:0046933
Adu04g00882 317 Pfam ATP synthase alpha/beta family, nucleotide-binding domain 1 134 IPR000194 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu04g00882 Adu-Chr4 13873148 13874287 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu04g00882 2 198 Primary Pumps ATPases(2) AT1G78900 29.577 2.09e-18 84.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu04g00882 K02112 - csin:114305725 558.525