Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu04g00843 ATGGAGTCAACTACCCCCTTCTTCTCCATCATCACGACCCTTATCTTCTACTCCTTAGTCTCACTCTCAGCTTCTTCAAATCCAAACAATCCATTCCCAAAAGAAGCTCTTCCTACTAAATCTGGTTACCTCCCAGTAAGTACATCATCTTCCTCTGCTATCTTCTATGCTTTCTATGAAGCTCATAACTCAACTTTACCTCTCTCCCAAACCCCTCTTCTCATTTGGCTCCAAGGTGGTCCCGGATGCTCCTCCATGATTGGCAACTTCTATGAGCTTGGACCATGGACTCTCACTGATGAATCACCCCTTACACTTCACCCTAACCCTGGTGCTTGGAACAGGATCTTTGGTCTCCTCTTTCTTGATAACCCCATTGGTTCTGGATTCAGTGTAGCAGCAACAACACAAGAAATCCCAACTGATCAAGATGGTGTTGCAAAGCATCTCTTTGCTGCTATAACAAGGTTTGTTGAGCTTGATCCTGTTTTCAAGAACCGTCCTATTTATATTACTGGTGAAAGTTATGCTGGGAAGTATGTTCCTGCTATTGGATACTATATATTAAAGGAGAATTCGCGGCTGCGCGGTTCTAAGAGAGTGAATTTGGCTGGTTTGGCTATTGGAGATGGGTTGACTGACCCTGTTACACAAGTGGTTACTCATGCTGTTAATGCTTATTATATTGGTTTGATCAATGAGAGGCAGAGGAATGAGTTGGAGAAGGATCAATTGGAAGCGGTTAGGTTAGCGCAGATTGGGAATTGGAGCGCTGCAACTGATGCAAGGAATGTGGTTTTGCGAAAGTTGAGGAATGTAACAGGGTTGGCTACTTTGTTTGATTACACAAGGAAAAAGCCCTATGGCGATGATGTAGTGGATAAATTCTTGAACAATGTGGAAGCTAAGAAGGCCTTAGGGGTGAAGAATGAGTCACTTGTGTTTGAAGGATGCAGCGATGTGGTTGGCGCCGTGTTACATGCTGATGTGATGAAGAGTGTGAAGTACATGGTAGAGGAATTGGTGAGGAACACTAGGGTGTTGTTATATCAAGGTCAGCATGATATTCAGGATGGAGTGGTTCAGGTCGAGGCGTGGGTGAAGACGATGAAGTGGGAAGGGATTGAGGATTTTTTGAATGCAGAGAGGAAGATATGGAAGGTGAACGGAGAGCTTGCTGGCTATGTCCAACAATGGAAGTCACTCACTAATGTTGTGGTGTTAGGGGCAGGGCATCTTTTACCTTCTGATCAACCTGTGACATCTCAAGCAATGATTGAAGATTGGGTCCTTGAAAAAGCCGGCATGTCGAAAGAAGTGACTGACGCACGCGAATTGAAGCAACTCACTGGAGGCAACCGCAAAATGGAGCATCCCCGTGTCGGCACCAGCGAAATGGCAGTCTCCGTCGAACATGCTTTGGTTGTTGCTGGTGACTAA 1440 0.4528 MESTTPFFSIITTLIFYSLVSLSASSNPNNPFPKEALPTKSGYLPVSTSSSSAIFYAFYEAHNSTLPLSQTPLLIWLQGGPGCSSMIGNFYELGPWTLTDESPLTLHPNPGAWNRIFGLLFLDNPIGSGFSVAATTQEIPTDQDGVAKHLFAAITRFVELDPVFKNRPIYITGESYAGKYVPAIGYYILKENSRLRGSKRVNLAGLAIGDGLTDPVTQVVTHAVNAYYIGLINERQRNELEKDQLEAVRLAQIGNWSAATDARNVVLRKLRNVTGLATLFDYTRKKPYGDDVVDKFLNNVEAKKALGVKNESLVFEGCSDVVGAVLHADVMKSVKYMVEELVRNTRVLLYQGQHDIQDGVVQVEAWVKTMKWEGIEDFLNAERKIWKVNGELAGYVQQWKSLTNVVVLGAGHLLPSDQPVTSQAMIEDWVLEKAGMSKEVTDARELKQLTGGNRKMEHPRVGTSEMAVSVEHALVVAGD 479
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu04g00843 479 Gene3D alpha/beta hydrolase 18 444 IPR029058 -
Adu04g00843 479 PANTHER CARBOXYPEPTIDASE 20 438 - -
Adu04g00843 479 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 20 438 IPR001563 GO:0004185|GO:0006508
Adu04g00843 479 PRINTS Carboxypeptidase C serine protease (S10) family signature 402 415 IPR001563 GO:0004185|GO:0006508
Adu04g00843 479 PRINTS Carboxypeptidase C serine protease (S10) family signature 109 121 IPR001563 GO:0004185|GO:0006508
Adu04g00843 479 PRINTS Carboxypeptidase C serine protease (S10) family signature 157 182 IPR001563 GO:0004185|GO:0006508
Adu04g00843 479 PRINTS Carboxypeptidase C serine protease (S10) family signature 122 132 IPR001563 GO:0004185|GO:0006508
Adu04g00843 479 ProSitePatterns Serine carboxypeptidases, serine active site. 171 178 IPR018202 GO:0004185
Adu04g00843 479 Pfam Serine carboxypeptidase 36 430 IPR001563 GO:0004185|GO:0006508
Adu04g00843 479 SUPERFAMILY alpha/beta-Hydrolases 38 430 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu04g00843 Adu-Chr4 12695376 12698045 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu04g00843 292 430 Calmodulin-binding Proteins AT2G22960 23.239 4.83e-10 57.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu04g00843 K09645 - gmx:102663282 674.47