Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu04g00839 ATGATTGCAACTAATAATGCATTCATTCATCTTACAGCAGCAGCAACAGCAGGGTTTCAATGGGGTTTCTTTGACTCTAGGGTTACAACAGCACGGTGGAAGCGGGTGAGCCTGGCATTCCCTCCTCCTTCGGTGAGCAGTCATCATAGCTCGCTCTTCTATGCAACAACCATTGATGCTGCTATGCCTACTATTGTTGGAATGGCACCGAAAAATCAGGATGCCATTGATGCTGCTATTGTTGGAATGCTTGCAGATCCCAAAGAGGCAAGGGCTAGAATCAGATATGTTCACTTTTTACCTTTCAATCCTGTTGACAAGAGAACTTCTCTGACTTACATTGATGCTGATGGAAACTGGTACTGTGCCAGCAAAGGCGCTCCGGAGCAGATCATGAACTTGTGTAATCTAAGGGATGATGCTAAGAAGAAGGTTCATGCCATTATTGATAAGTTCGCCGAAAAAGGCCTTCGTTCCCTAGCCATTTCAAGACAGGAAGTTCCTTCTTGGCAAGACAAAGATGCAAGTATCGCCACACTTCCCGTCGAAGAGTTAATTGAGAAAGCCAATGGATTTGCCGGAATCTTTCCAGTTTTGATGGGTCGTCTTTCTTCAATGTTCAATGGGTTGGCAAAATCACTGACAATTAAGAAAGGGAGGAATTCAGAAAGATGCAGCGGAAGAGAAGCGGCGCAGAAGGAAGCAAAAAAGAATGAGTTCTTATTATGTAGCTCAGGTAATATTTATTTACACGGACATGAACAATGA 768 0.4375 MIATNNAFIHLTAAATAGFQWGFFDSRVTTARWKRVSLAFPPPSVSSHHSSLFYATTIDAAMPTIVGMAPKNQDAIDAAIVGMLADPKEARARIRYVHFLPFNPVDKRTSLTYIDADGNWYCASKGAPEQIMNLCNLRDDAKKKVHAIIDKFAEKGLRSLAISRQEVPSWQDKDASIATLPVEELIEKANGFAGIFPVLMGRLSSMFNGLAKSLTIKKGRNSERCSGREAAQKEAKKNEFLLCSSGNIYLHGHEQ 255
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu04g00839 255 Gene3D - 53 188 IPR023299 GO:0000166
Adu04g00839 255 Pfam Cation transport ATPase (P-type) 82 136 - -
Adu04g00839 255 PANTHER CALCIUM-TRANSPORTING ATPASE 71 168 - -
Adu04g00839 255 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 71 195 IPR023299 GO:0000166
Adu04g00839 255 PANTHER PLASMA MEMBRANE ATPASE 171 197 - -
Adu04g00839 255 PANTHER PLASMA MEMBRANE ATPASE 71 168 - -
Adu04g00839 255 PANTHER CALCIUM-TRANSPORTING ATPASE 171 197 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu04g00839 Adu-Chr4 12557806 12560036 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu04g00839 71 175 Primary Pumps ATPases AT2G24520 74.286 7.38e-50 172
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu04g00839 K01535 - ahf:112801147 366.311