Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu04g00836 ATGGGAACTTCAGAAGCAAAAGAAGAAGAGCTTGTGAAGAAGATAGAGAAGCTTGAAGCTGGCCATGTTCAGCTGAAGCATGAGATGTCGAAGCTGAAGCTATCTGAACGCCGCCATCATCACCGCCACAGGTCGCACTCCTTGTCGCCGCAGCGTTCGAGGCTTGGCGGTTGTGGCGGTGGCGGGGGTGCTGCTGCTGGTTGTAACAACAAAGGTGAGAAGCAGTATATGAACATTTTGCAGTCAATGGGGCACTCGCTTCATATTCTGGATCTTCAATGCCGGATTATATATTGGAATCCTAGTGCCGAAAATCTGTATGGTTATGCAGCAGTAGAGGCTCTTGGAAAAGATGGGATTGAGCTGCTCGTAGACCCTATTGATTTCGGCTTAGCATATGATGTTTTCAACCATGTCACTGTGGGGGAGAGTTGGAGCGGCCAGTTCCCTGCCAAGAACAAGATGGGGGAGAAATTTTCAGTTGTGGCAACCAACACACCATTCTATGATGACGATAGGAAGTTGATTGGGGTTATCTGTGTGTCCATTGATTCTAGACCCTTTCTTGAAACTCGAGCTACTTTATCAGATGTGAAGAATGCTGCACCAGGTTCAGACTTGGATTATAACCACGCGAAGAGTGGCATTTCAAATAAACTTGGCCTTGACTCTCAGCAGCCACTTCAAGTTGCTCTAGCATCCAAAATTTCTAATTTGGCATCAAAGGTGAGTAATAAAGTTAAGTCAAGAATGCGGACAGGAGAAAATGGTGTTGACCGTTATGGTTGGAGCGGAGAAAGTCATCATTCTGATCAGAGTTTTTCGGATTGTGTTTTTTCTGACCAGAAAGAGGATGGTAATTCCAGTGGAGCTAGCACTCCCAGAGGTGATGTACCACCTCCATTCGGTGTATTTTGTCATGTTGAAGAGAAATCACCAGCTAAATCTTTGAGAGACTCTGGTGACGATGGCGAAGGAAAACCAATTCACAAGATCATAACTTCTAAAGCTGAAGCATGGATTCAAAAGAGAACATTGTCATGGCCATGGAGAGGAAATGGTCAAGCTGGATCCGAGGCAAGAAATGTTCCTGTTGCTAGGCCACTGGTGCAGAATGATCAAGAACATGAACTGGTTAATCAGATGAATCTTTCTTCCGAGTCCAAGATGGAAGTCCAGGCAGGTAATCGGCCTGTTAATAATGAGGCTTCAGGATCGTGGTCCTCAGTTAACGTTAACAGTACTAGCAGTACCAGCAGCTGCGGCAGTGGCAGCAGTGGTGCTGTCAATAATAAAGTGGATATTGATACCGATTGCTTGGATTATGAAATCTTGTGGGAGGACCTCACAATTGGAGAACAAATTGGGCAAGGTTCTTGTGGAACTGTATATCATGCCCTGTGGTATGGATCAGATGTTGCGGTCAAAGTATTCTCAAAGCAAGAATATTCAGAGGATGTGATACTATCCTTCAGACAAGAGGTGTCTGTCTTGAAAAGACTTCGCCATCCAAATATTATTCTCTTCATGGGGGCAGTGACTTCACCTCAACGTCTCTGCATTGTGACAGAGTTTCTCCCACGTGGAAGCTTGTTTCGTTTGCTCCAAAGAAATACATCCAAACTTGACTGGAGACGGCGAGTTCATATGGCTTTAGATATCGCACGTGGTGTGAATTATCTTCATCGTTGCAGCCCCCCTATTGTTCATCGAGATTTGAAGTCTTCAAATCTCCTAGTTGACAAGAATTGGACTGTGAAGGTTGGTGATTTTGGTCTTTCACGCCTTAAGCATGAAACATATCTCACAACCAAAACAGGAAAGGGCACGATTGAAATTTCACATTGGATATCTGATTATGCTGCTTCTCGGGACTTCAGGTCCGATGTGTACAGCTTTGGGGTGATATTGTGGGAACTTGCAACTGAAAAGATCCCGTGGGATACTCTCAATGCAATGCAGGTTATTGGGGCTGTAGGGTTTATGAACCATCGGTTAGAAATTCCGGCAGATGTTGATCCGCAGTGGGCTTCTATAATGGAGAGCTGCTGGCATAGCGATCCGGCTCAGCGACCAACATTCCAGGAACTTGTGGAAAGGCTCAGAGAAATGCAGAGACGACATGCCATTCAGCTCCAGGCGGCTCGTTCTGCCAGCGGTGGAAGCAATCAGAAGGAATCTTAA 2184 0.4556 MGTSEAKEEELVKKIEKLEAGHVQLKHEMSKLKLSERRHHHRHRSHSLSPQRSRLGGCGGGGGAAAGCNNKGEKQYMNILQSMGHSLHILDLQCRIIYWNPSAENLYGYAAVEALGKDGIELLVDPIDFGLAYDVFNHVTVGESWSGQFPAKNKMGEKFSVVATNTPFYDDDRKLIGVICVSIDSRPFLETRATLSDVKNAAPGSDLDYNHAKSGISNKLGLDSQQPLQVALASKISNLASKVSNKVKSRMRTGENGVDRYGWSGESHHSDQSFSDCVFSDQKEDGNSSGASTPRGDVPPPFGVFCHVEEKSPAKSLRDSGDDGEGKPIHKIITSKAEAWIQKRTLSWPWRGNGQAGSEARNVPVARPLVQNDQEHELVNQMNLSSESKMEVQAGNRPVNNEASGSWSSVNVNSTSSTSSCGSGSSGAVNNKVDIDTDCLDYEILWEDLTIGEQIGQGSCGTVYHALWYGSDVAVKVFSKQEYSEDVILSFRQEVSVLKRLRHPNIILFMGAVTSPQRLCIVTEFLPRGSLFRLLQRNTSKLDWRRRVHMALDIARGVNYLHRCSPPIVHRDLKSSNLLVDKNWTVKVGDFGLSRLKHETYLTTKTGKGTIEISHWISDYAASRDFRSDVYSFGVILWELATEKIPWDTLNAMQVIGAVGFMNHRLEIPADVDPQWASIMESCWHSDPAQRPTFQELVERLREMQRRHAIQLQAARSASGGSNQKES 727
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu04g00836 727 SMART serkin_6 449 699 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu04g00836 727 MobiDBLite consensus disorder prediction 389 427 - -
Adu04g00836 727 SUPERFAMILY Protein kinase-like (PK-like) 438 701 IPR011009 -
Adu04g00836 727 MobiDBLite consensus disorder prediction 33 49 - -
Adu04g00836 727 PRINTS Tyrosine kinase catalytic domain signature 523 536 IPR001245 GO:0004672|GO:0006468
Adu04g00836 727 PRINTS Tyrosine kinase catalytic domain signature 672 694 IPR001245 GO:0004672|GO:0006468
Adu04g00836 727 PRINTS Tyrosine kinase catalytic domain signature 628 650 IPR001245 GO:0004672|GO:0006468
Adu04g00836 727 PRINTS Tyrosine kinase catalytic domain signature 562 580 IPR001245 GO:0004672|GO:0006468
Adu04g00836 727 PANTHER SERINE/THREONINE-PROTEIN KINASE DDB_G0282963 ISOFORM X1-RELATED 73 725 - -
Adu04g00836 727 CDD PAS 89 184 IPR000014 -
Adu04g00836 727 SUPERFAMILY PYP-like sensor domain (PAS domain) 78 181 IPR035965 -
Adu04g00836 727 Coils Coil 8 35 - -
Adu04g00836 727 CDD STKc_MAP3K-like 455 701 - -
Adu04g00836 727 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 73 725 - -
Adu04g00836 727 ProSitePatterns Serine/Threonine protein kinases active-site signature. 568 580 IPR008271 GO:0004672|GO:0006468
Adu04g00836 727 ProSiteProfiles Protein kinase domain profile. 449 711 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu04g00836 727 Pfam Protein tyrosine and serine/threonine kinase 449 701 IPR001245 GO:0004672|GO:0006468
Adu04g00836 727 MobiDBLite consensus disorder prediction 267 294 - -
Adu04g00836 727 Gene3D PAS domain 85 186 - -
Adu04g00836 727 SMART pas_2 74 141 IPR000014 -
Adu04g00836 727 Gene3D Phosphorylase Kinase; domain 1 442 526 - -
Adu04g00836 727 MobiDBLite consensus disorder prediction 245 300 - -
Adu04g00836 727 MobiDBLite consensus disorder prediction 33 56 - -
Adu04g00836 727 Gene3D Transferase(Phosphotransferase) domain 1 527 727 - -
Adu04g00836 727 TIGRFAM sensory_box: PAS domain S-box protein 73 184 IPR000014 -
Adu04g00836 727 Pfam PAS domain 89 184 IPR000014 -
Adu04g00836 727 ProSiteProfiles PAS repeat profile. 72 143 IPR000014 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu04g00836 Adu-Chr4 12404323 12410482 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu04g00836 9 718 MAP Kinase Kinase Kinase AT3G06620 55.222 0.0 824
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_CTR1-DRK-2 Adu04g00836 PK_Tyr_Ser-Thr 2.1e-61 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu04g00836 - - gmx:100800867 986.867
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu01g02996 01 100785939 100792204 Adu04g00836 04 12404323 12410482 PCT