Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu04g00833 ATGGCTTCTTCTTTTCATGCTTCTTCAGCAATAATATCATCCATAATAGTGTCAATAATTATTCTCATTTGCATGCCATGTTCTGCTTTTGGCTTTATTAATGAGAAAGAGGTTATAGATGCTCCTTTGTTAACACAAAAGTTAGGAATTAATCGCACCATCAAAGTAGATATTAATGGCAATGGGGACTTCAAATCTGTTCAAGCTGCCATTGATTCCATTCCCGAAGGGAATTCCAATTGGGTCATTCTCCATGTTAGGAAAGGAGTATACAGAGAAAAGGTACACATACCAAAGACTAAGCGTTACATATTCATGAGAGGGAATGGAAAGGGAAGAACAGCCATAGTTTGGTCTCAAAGCTCCTCCGATAACATTGATTCTGCTACCTTCAAAGTTGAAGCCCGTGATTTCATTGCATTTGGAATTAGCTTCAAGAACGAAGCACCAACGGGTATTGCATATACCTCACAGAATCAATCGGTGGCAGCATTTGTGGCTGCAGACAAAATTGCATTTTACCATTGTGCATTTTTCAGTACTCATAACACTCTCTTTGATTACAAAGGCAGACACTACTATGAGTCTTGCTACATTCAAGGCTCAATTGATTTCATTTTTGGCCGTGGCAGATCCATCTTTGAGGGGTGTGAGATATTTGTAATTGATGACAAAAGGGTCACAATTCATGGGTCAATCACAGCACAAAACAGGGAGAGTGAACGAGAGATAAGTGGATTCATATTCAATAAATGCAGGGTTTATGGCATTGGTGGGGTGTACCTAGGAAGGGCTAAGGGTCCTTATTCTAGGACCATTTTTGCTCACTCTTATCTCTCCAAGACTGTTGTTCCTGAGGGTTGGACCAATTGGAGCTATGATGGTCCCACAAAGAATCTGTATCATGCTGAGTACAAGTGCTATGGACCAGGAGCCACAAGAGAGGGAAGAGCTTCATGGTCAAGACAACTTAGTGACCAAGAAGTTGCTTCATTTTTGTCTGTTGATTACATAGATGGCAAGAATTGGTTGCCAGCGTGGCACTAA 1047 0.4078 MASSFHASSAIISSIIVSIIILICMPCSAFGFINEKEVIDAPLLTQKLGINRTIKVDINGNGDFKSVQAAIDSIPEGNSNWVILHVRKGVYREKVHIPKTKRYIFMRGNGKGRTAIVWSQSSSDNIDSATFKVEARDFIAFGISFKNEAPTGIAYTSQNQSVAAFVAADKIAFYHCAFFSTHNTLFDYKGRHYYESCYIQGSIDFIFGRGRSIFEGCEIFVIDDKRVTIHGSITAQNRESEREISGFIFNKCRVYGIGGVYLGRAKGPYSRTIFAHSYLSKTVVPEGWTNWSYDGPTKNLYHAEYKCYGPGATREGRASWSRQLSDQEVASFLSVDYIDGKNWLPAWH 348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu04g00833 348 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 13 347 - -
Adu04g00833 348 PANTHER PECTINESTERASE 67-RELATED 13 347 - -
Adu04g00833 348 ProSitePatterns Pectinesterase signature 2. 199 208 IPR033131 -
Adu04g00833 348 Gene3D - 48 348 IPR012334 -
Adu04g00833 348 SUPERFAMILY Pectin lyase-like 50 346 IPR011050 -
Adu04g00833 348 Pfam Pectinesterase 55 340 IPR000070 GO:0030599|GO:0042545
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu04g00833 Adu-Chr4 12356992 12358922 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu04g00833 51 344 Carbohydrate Esterase AT5G47500 39.145 1.61e-72 228
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu04g00833 - - mtr:MTR_2g033970 569.311