Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu04g00828 ATGAAACTCAATTCAGAGATGGGTTCACCATCTCTGATCCCAACAGCACTCACCTCTACCCCATCACGTGACTCGCACGTGCACAACCACAACAAGAAGAAAAAGCCTCATTCCAAGAACCACAAACAGAAGAACAACCGCCAAGTCAACAAATGGAAATCCCAAACACAACAAAACCTCTACTCCACCAAACTCCGGCAAGCCCTCGCCGGATCCACCCTATCGGGCGGCGGTAAGTCCATCCGCGAAACCGCCGACAGAGTTCTTGCCAGCGCCGCAAGAGGTAGAAGCCGGTGGAGCCGCGCCATACTCACGAACCGGCTCAAGCTGCGCTTCATGAAGAACAAGATAAAGAAGAAGAAGAAAAGAGTGGGGCCGATAGTCAAGTCGAGAAGAACAAGAACCCGGTTGAACGTGGTTCGATTGAAGGTAAAGACAGTTCCGGCGGTTCAGAAGAAAGTGAGGTTGTTGGGAAGGTTGGTTCCTGGTTGCAGGAAGGAACCTCTTCCGGTGATTCTAGAAGAAGCCATTGATTATATACCTGCTCTTGAGATGCAGGTTCGCGCCATGACTGCTCTCGCTAACTTGTTGTTAGCGAATTCTTCTTCTTCTTCTTCTCCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCCTCCGGTCATGCTCCTCCCACCTGA 786 0.4771 MKLNSEMGSPSLIPTALTSTPSRDSHVHNHNKKKKPHSKNHKQKNNRQVNKWKSQTQQNLYSTKLRQALAGSTLSGGGKSIRETADRVLASAARGRSRWSRAILTNRLKLRFMKNKIKKKKKRVGPIVKSRRTRTRLNVVRLKVKTVPAVQKKVRLLGRLVPGCRKEPLPVILEEAIDYIPALEMQVRAMTALANLLLANSSSSSSPSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSGHAPPT 261
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu04g00828 261 MobiDBLite consensus disorder prediction 1 24 - -
Adu04g00828 261 PANTHER TRANSCRIPTION FACTOR IBH1-LIKE 1 21 214 IPR044660 GO:0006355
Adu04g00828 261 MobiDBLite consensus disorder prediction 1 57 - -
Adu04g00828 261 PANTHER MYC-TYPE, BASIC HELIX-LOOP-HELIX (BHLH) DOMAIN-CONTAINING PROTEIN-RELATED 21 214 - -
Adu04g00828 261 CDD bHLH_AtIBH1_like 148 194 IPR044549 GO:0006355
Adu04g00828 261 MobiDBLite consensus disorder prediction 27 48 - -
Adu04g00828 261 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 153 203 IPR036638 GO:0046983
Adu04g00828 261 MobiDBLite consensus disorder prediction 202 261 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu04g00828 Adu-Chr4 12250054 12250839 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu04g00828 49 193 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G17100 47.305 6.69e-43 144
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu04g00828 - - adu:107483409 315.849
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu04g00828 04 12250054 12250839 Adu04g00828 04 12250054 12250839 ECH
Adu01g02544 01 94745331 94745972 Adu04g00828 04 12250054 12250839 PCT