Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu04g00827 ATGGAAGGAAAGAATAAACCACCACCACAAATCTTTTCACCGCCATTTTCATTGTCCATATCCACCACTACAATCAATGATCTCAGCTTTCTCAACGATGATACGTTTTTTAAAAAGCTACTTACTGATTTAGTAAAAGAGGGAGATTTTGGTTCTCTTCCTTCTCTACCTCCAGACACAATTGTTCTAGAATCTTTTGAAACAGTTGCACAATCACAAAGGTTGAAACTGAGACCATCTACAATGACATCGATTGCAGCAACCACGAGGATAAATAGAAGGAGCCAAAATAATCTTTCGAAATTTGCTTGTTTGACAGAGAGTGAATCAGACAACCTTAGATATGGCTATAAATGGCGCAAGTACGGTAAAAAAACCGTGAGAAACAGCCCTTACCCAAGGAACTATTATCATTGCACAGCAATTGGTTGCAATGTGAAGAAGAGAGTGGAGCGGTGGTTAGATGATCCCACCCATGTATTAACCACCTATGAGGGTCTACACCTTCATGATTTGCCACCGATCTCCTCTACTCTTTTGAAGTCCTTCGGCTTCTACAACAACTGCACCACTGGCCCCAAACCTCACAGAGGCAACTGTAGCTGTCGATGTAAAATGGTAAATCGAGGTGATAATCACCTTTGA 645 0.4109 MEGKNKPPPQIFSPPFSLSISTTTINDLSFLNDDTFFKKLLTDLVKEGDFGSLPSLPPDTIVLESFETVAQSQRLKLRPSTMTSIAATTRINRRSQNNLSKFACLTESESDNLRYGYKWRKYGKKTVRNSPYPRNYYHCTAIGCNVKKRVERWLDDPTHVLTTYEGLHLHDLPPISSTLLKSFGFYNNCTTGPKPHRGNCSCRCKMVNRGDNHL 214
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu04g00827 214 Coils Coil 213 214 - -
Adu04g00827 214 PANTHER WRKY TRANSCRIPTION FACTOR 48-RELATED 100 176 - -
Adu04g00827 214 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 100 176 IPR044810 GO:0003700
Adu04g00827 214 SUPERFAMILY WRKY DNA-binding domain 109 173 IPR036576 GO:0003700|GO:0006355|GO:0043565
Adu04g00827 214 SMART WRKY_cls 113 172 IPR003657 GO:0003700|GO:0006355|GO:0043565
Adu04g00827 214 Pfam WRKY DNA -binding domain 116 170 IPR003657 GO:0003700|GO:0006355|GO:0043565
Adu04g00827 214 ProSiteProfiles WRKY domain profile. 108 173 IPR003657 GO:0003700|GO:0006355|GO:0043565
Adu04g00827 214 Gene3D WRKY domain 98 174 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu04g00827 Adu-Chr4 12064574 12065837 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu04g00827 100 173 WRKY Transcription Factor Family AT5G49520 64.865 5.95e-30 112
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Adu04g00827 WRKY 3.3e-19 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu04g00827 - - ahf:112794660 437.573