Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu04g00826 ATGGAAGAAAAAAATACACCACCACTTCTTCCACCTCTACCATCACCGCCACAAATTTTTTCACCGCCATCACCACCATTTTCATTGTCTATACCCACTACTACTATCAATGATCTCAGCTTTCTCAATGATGATACGTTTTTTGAAAAGCCACTTATTGATTTAGTAAAAGAAGGAGACTTTGGTCCTTCTTTGTATGAGTGGTTAGGCATCGCCCATGAGGATGCTCCACCAGTTAAAAGACCAGTAAAGCATCCTCTTTGTTCTTTTCCTCCGGCCGCAATTGTTCTAGAATCTTCTAAAACAGTTGAACAATCACAAAACTCATCCTTTTCCTTAATCGCATCCAATCTTGACGTCGCTGTTGGTAACAACAATAATTGCAATAGAGTTTCCGGGATTAAACGTCCAGCAAAATCTGTTGTCGGTGACGGTGGAAATCAAAGTCTGAGAAGTGATGATGAACCTGGTGATGAAAAAATTAATATTATAACTAGGCTGAAACTGAGCCCATCTACAATGACATCGATTGCAGCTACCATGAAGATAAATAGAAGGAGCGAAAATAATCTTCCAAAACTTGCTTTCTTGACGGAGAGTGAATCAGACAACCTTGAAGATGGTTATAGATGGCGCAAGTACGGTCGAAAAACCGTGAGAAACAGCCCTTATCCAAGGAACTACTATCGTTGCACAACAATTGGTTGCAATGTGAAGAAGAGAGTAGAGCGGTGGTTAGATGATCCCACCCATATATTAACCACCTATGAGGGTCTACACCTTCATGCTTTGCCACCGATCCCCCCTACTCCTTTTAAGTCCTTCAGCCTCTACAAAAACTGTACCACTGGCCCCAAACCTGACGGAGGCAGCTGTAGCTGTCGATGTAAAGGTGCAGTCACAGTTGCAGGTGCAGGTGCAGATGCAGGGGAACAAAATCGTGCTAATAACGCTATTACTAGTGTTCATCTTAGAACTGTCAGTGGTGGTAGCGGTGTTAATGACGGTGGCTCGCAGCGCATTGTGGCAGGTGAAAATGAATTTAATTATAACAAACACATGCAGAATGTAGAAAAAGCAATTACACCAATACTGTTACAGAACTTCAAGTTAATTGCTCCACAGACTTTCTTGAATAATGCTACTCCCATGACTGTTACTAATAATGGTCATTACCAATCATCACTGATGAGTAGTGTTCATCATGGTAACAATCATCGTCAAGATTGTTTTGGTGCTGGATCTTCAAATGGTGGTGCCGAGGATTCGTTTAGGAAGAAGAGCACTGGTACCGGGCTGCTTGAAGATATTGTTAATTTCTCATGA 1326 0.4178 MEEKNTPPLLPPLPSPPQIFSPPSPPFSLSIPTTTINDLSFLNDDTFFEKPLIDLVKEGDFGPSLYEWLGIAHEDAPPVKRPVKHPLCSFPPAAIVLESSKTVEQSQNSSFSLIASNLDVAVGNNNNCNRVSGIKRPAKSVVGDGGNQSLRSDDEPGDEKINIITRLKLSPSTMTSIAATMKINRRSENNLPKLAFLTESESDNLEDGYRWRKYGRKTVRNSPYPRNYYRCTTIGCNVKKRVERWLDDPTHILTTYEGLHLHALPPIPPTPFKSFSLYKNCTTGPKPDGGSCSCRCKGAVTVAGAGADAGEQNRANNAITSVHLRTVSGGSGVNDGGSQRIVAGENEFNYNKHMQNVEKAITPILLQNFKLIAPQTFLNNATPMTVTNNGHYQSSLMSSVHHGNNHRQDCFGAGSSNGGAEDSFRKKSTGTGLLEDIVNFS 441
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu04g00826 441 MobiDBLite consensus disorder prediction 1 24 - -
Adu04g00826 441 Pfam WRKY DNA -binding domain 206 262 IPR003657 GO:0003700|GO:0006355|GO:0043565
Adu04g00826 441 SMART WRKY_cls 205 264 IPR003657 GO:0003700|GO:0006355|GO:0043565
Adu04g00826 441 Gene3D WRKY domain 191 266 IPR036576 GO:0003700|GO:0006355|GO:0043565
Adu04g00826 441 ProSiteProfiles WRKY domain profile. 200 265 IPR003657 GO:0003700|GO:0006355|GO:0043565
Adu04g00826 441 PANTHER WRKY TRANSCRIPTION FACTOR 48-RELATED 147 274 - -
Adu04g00826 441 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 147 274 IPR044810 GO:0003700
Adu04g00826 441 MobiDBLite consensus disorder prediction 7 24 - -
Adu04g00826 441 SUPERFAMILY WRKY DNA-binding domain 198 265 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu04g00826 Adu-Chr4 12059974 12061733 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu04g00826 193 268 WRKY Transcription Factor Family AT5G49520 68.421 1.64e-32 125
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Adu04g00826 WRKY 9.7e-22 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu04g00826 - - adu:107483375 836.254