LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Adu04g00815	ATGTCAATGGATACACCAATTTTTGAAGAAGCATTGTACGGCAGTGCGTATGACACGAGGGAGAATTCTAATTCAACCGACATTAATGTTCCGTGTTTGAGTGAAGATGACACACCACATGTAGAACAGGAAAAAGAATCTGAAGACGCTATTCAGAAAAAGGATGATGCTACGGTCCCGGATCACACTGGAATTCCAATGGAGGAAATTCCGTACGTAGGATTGAGATTTGATTCGTTACAGCAGGCACAAGAGTTCTATTCTAATTATGCGAAGAAGGTTGGGTTTGTGACGAGGATTAGGAATACAAACTTTGACAAGACTAGGAAGGAATTAAAGGTACCTATTAATCAATCGATACACTACAGTCATGAAGGTTATCAGGAGTCTCGAGTGAAGGCAGCAATGCAGGTAAAGAGAATAACAACAGCTGGGTGCAAAGCAAGGATGTACGTGATGCTTGATAGGCATAATGATAATTGGTTGGTGACCAAATTAGAATTGAAGCACACCCACGCGTGTTCTGCCGAGCAAGCTGTGCATTACACACAAGATTTTGTGACATGTGAAGAGGAAGCGGCCATGTTACATTTGGGTCTTGATCAGTTAAGGTCAAAGTTGCTTGATTGTCGTGTGAACTTGGTGTCTAGGCGTGTTCCAAGTTCACAAAACATCATGGTCACACAGGGAGACCCCCATCTTGGTGAATCTGACATCCAAGGTCCTTCAAAGGTTTCAACGAAGGGTCGGCCGAGAATGAAGAGGCTTGGATCTGAACTCGACGCCTCAATCAAGAACTCTATGCGAAGAAAGAAGAAGAATCCACCGCTGGATGTTCATCAAGCATTGAATCAAGATGTAGTGTGTTGTTCTGCTAGGAGAGCGAATGGATCACAGGAACATGGCGGGTTCTTGTCGTTGTTAAACTCATTTCAGCCTACTTAA	945	0.4339	MSMDTPIFEEALYGSAYDTRENSNSTDINVPCLSEDDTPHVEQEKESEDAIQKKDDATVPDHTGIPMEEIPYVGLRFDSLQQAQEFYSNYAKKVGFVTRIRNTNFDKTRKELKVPINQSIHYSHEGYQESRVKAAMQVKRITTAGCKARMYVMLDRHNDNWLVTKLELKHTHACSAEQAVHYTQDFVTCEEEAAMLHLGLDQLRSKLLDCRVNLVSRRVPSSQNIMVTQGDPHLGESDIQGPSKVSTKGRPRMKRLGSELDASIKNSMRRKKKNPPLDVHQALNQDVVCCSARRANGSQEHGGFLSLLNSFQPT	314

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Adu04g00815	314	MobiDBLite	consensus disorder prediction	17	32	-	-
	Adu04g00815	314	Pfam	FAR1 DNA-binding domain	85	174	IPR004330	-
	Adu04g00815	314	MobiDBLite	consensus disorder prediction	14	51	-	-
	Adu04g00815	314	PANTHER	FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED	36	178	-	-
	Adu04g00815	314	MobiDBLite	consensus disorder prediction	37	51	-	-
	Adu04g00815	314	MobiDBLite	consensus disorder prediction	226	251	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Adu04g00815	Adu-Chr4	11846768	11851348	Dispersed/Transposed

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	FAR1	Adu04g00815		FAR1	6.6e-13	CL0274

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Adu04g00815	-		-	ahf:114927550	362.073