Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu04g00802 ATGGATATGAAACGAAGGCTAAACAACAACAACAATGACAATAACGACGATGACATGGAACTCCGAAGAGGTCCATGGACTGTCGACGAAGACCTTACCCTCATCAATTACATTGCCAATCACGGCGAAGGTCGCTGGAATTCTCTTGCCCGCTCTGCCGGACTGAAACGAACCGGGAAGAGCTGCAGATTGAGATGGTTGAATTATTTGCGCCCAGATGTTAGACGTGGTAACATCACTCTTGAAGAACAGCTTCTTATTCTTGAGCTCCATGCTAGTTGGGGAAACAGATGGTCCAAAATTGCTCAATACCTACCTGGAAGAACTGACAACGAGATCAAGAACTATTGGAGAACTCGTGTTCAAAAGCATGCGAAACAACTCAAATGTGATGTAAATAGCAAGCAATTCAAAGACACCATGCGCTTCCTTTGGATGCCAAGACTAGTGGAACGGATACAGGCGGCCGCAGCAACGGTTACAACTGCTGCAACCGCCACGTCCGATTCTCCGACTTTATCAGCTACTAAATCAGTCACTATTATCAACAACAATAATACTACTACAGCATACAACTTCGACAACCTTAACAACTTGGAGGTTCATAGTGGAAACATTATGAATATGAGCAACAACAACTTTGGTTATGCTACTCCAGAGAATAGTAGCACAGGAACATCATCAGATTCGTTTGTCACACAAGATTATTGCAACAATAATAATAATAATGTTCATGTTGGTAACAACAACAACAACAATGAACCTAGTTCGGATTATTACCATCAACAAGGAAATAACAACAACCAAGTTAGCTTCATGGATTGCATCACTAGTCCATCCTCCATGTCATTGTTCCCTCATCAAGAGATGGATTTCCAAGCCATGGAATTACCAAACACCCCTTGGATTAATAATCCCTCTACATTCAGCAATTTCTGGAATGATGAAAACATGTTGCTTCTACAAAATCTAGGATGTGGTGGTGACAACATGTGA 996 0.4177 MDMKRRLNNNNNDNNDDDMELRRGPWTVDEDLTLINYIANHGEGRWNSLARSAGLKRTGKSCRLRWLNYLRPDVRRGNITLEEQLLILELHASWGNRWSKIAQYLPGRTDNEIKNYWRTRVQKHAKQLKCDVNSKQFKDTMRFLWMPRLVERIQAAAATVTTAATATSDSPTLSATKSVTIINNNNTTTAYNFDNLNNLEVHSGNIMNMSNNNFGYATPENSSTGTSSDSFVTQDYCNNNNNNVHVGNNNNNNEPSSDYYHQQGNNNNQVSFMDCITSPSSMSLFPHQEMDFQAMELPNTPWINNPSTFSNFWNDENMLLLQNLGCGGDNM 331
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu04g00802 331 SMART sant 22 72 IPR001005 -
Adu04g00802 331 SMART sant 75 123 IPR001005 -
Adu04g00802 331 MobiDBLite consensus disorder prediction 244 264 - -
Adu04g00802 331 CDD SANT 96 119 IPR001005 -
Adu04g00802 331 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 18 74 IPR017930 -
Adu04g00802 331 Gene3D - 20 76 - -
Adu04g00802 331 PANTHER MYB TRANSCRIPTION FACTOR 1 324 - -
Adu04g00802 331 Pfam Myb-like DNA-binding domain 76 119 IPR001005 -
Adu04g00802 331 Pfam Myb-like DNA-binding domain 23 70 IPR001005 -
Adu04g00802 331 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 75 125 IPR017930 -
Adu04g00802 331 ProSiteProfiles Myb-like domain profile. 71 121 IPR001005 -
Adu04g00802 331 SUPERFAMILY Homeodomain-like 20 117 IPR009057 -
Adu04g00802 331 MobiDBLite consensus disorder prediction 1 22 - -
Adu04g00802 331 Gene3D - 80 142 - -
Adu04g00802 331 ProSiteProfiles Myb-like domain profile. 18 70 IPR001005 -
Adu04g00802 331 CDD SANT 25 70 IPR001005 -
Adu04g00802 331 PANTHER MYB TRANSCRIPTION FACTOR-RELATED-RELATED 1 324 IPR044676 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu04g00802 Adu-Chr4 11486321 11488369 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu04g00802 1 255 MYB Transcription Factor Family AT3G06490 62.891 1.36e-86 261
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Adu04g00802 Myb_DNA-binding 3.3e-15 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu04g00802 K09422 - gmx:100805341 393.275