Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu04g00796 ATGGTGGCGGAAGCGGAAATCATGTTTCAGCAGAGCATTCCGGTGCTGGATGTGAAGTATCATCTATGCGCAATGCAAGAGCACGCCGTTAAGGAATCGGCTGTGAGTTGCTCTGAGTTGATTGAAGATACCGTTTTAGAGACTCATGTTACCACATTTACTCCAACGGTTTGTTCTGGAAGCTGTGCTGATATTGGACCAAGGGGATCCATGGATGATGAGCACATCCAAATAGATGATCTAGCTGCCCACCTTGGATTTGTGTTCAAATACCCTATACGGAATGCACTTTCCCTAAAATGGTTGGAGGATTCTCATAGGAAAGCATTCTTAGGGGCAGACCTTGCCTTGGCTGGTGAACGGAGTGTTAGTCATACTTATGGGACAACAGCATTGACTGCCCTTATACTTGGAAGGCATTTACTGGTTGCCAATGCTGGTGATTGTCGAGCAGTTCTTTGTAGGCGAGGAGTAACAGTTGAGATGTCTCATGATCACAGACCGAGTTATTTACCAGAACGGAGGAGAGTGGAAGAGTTAGGTGGTTTCATCTATGATGGGTATCTCAATGGTGATCTTTCTGTCACCCATGCCCTTGGTGATTGGAAGTTGAAGTATCCATTTGGGACTGCGTTGCCTCGTATTGTTCCAGATATTCAAGTATTTACATTGACAGAGAAGGACGAGTTCTTGATTATTGGGTGCGACGGCATTTGGGATGTAATGTCAAGCCAGGAAGCAGTTAGTTTCGTGCGTCGACAATTGAGAAGGCATGATGATCCACAACAATGTGCCAAAGAACTAGTTAAGGAAGCATTGCACCTCAATACAACAGATAATCTTACTGTGATTGGTATATGCTTATCCCCGGTGGAAAAGATTGTTGAATCTCTCCCACCGCATAGGCGAAGATTCAGAGCTTGCTTCCTATCTGAAGAGGCCAGATTGAGGAGCTTACTTGAAGGAAAATAA 972 0.4486 MVAEAEIMFQQSIPVLDVKYHLCAMQEHAVKESAVSCSELIEDTVLETHVTTFTPTVCSGSCADIGPRGSMDDEHIQIDDLAAHLGFVFKYPIRNALSLKWLEDSHRKAFLGADLALAGERSVSHTYGTTALTALILGRHLLVANAGDCRAVLCRRGVTVEMSHDHRPSYLPERRRVEELGGFIYDGYLNGDLSVTHALGDWKLKYPFGTALPRIVPDIQVFTLTEKDEFLIIGCDGIWDVMSSQEAVSFVRRQLRRHDDPQQCAKELVKEALHLNTTDNLTVIGICLSPVEKIVESLPPHRRRFRACFLSEEARLRSLLEGK 323
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu04g00796 323 Gene3D - 42 292 IPR036457 -
Adu04g00796 323 Pfam Protein phosphatase 2C 101 280 IPR001932 -
Adu04g00796 323 PANTHER PROTEIN PHOSPHATASE 2C 1 94 IPR015655 GO:0004722|GO:0006470
Adu04g00796 323 SUPERFAMILY PP2C-like 49 290 IPR036457 -
Adu04g00796 323 PANTHER PROTEIN PHOSPHATASE 2C-LIKE PROTEIN 96 312 - -
Adu04g00796 323 PANTHER PROTEIN PHOSPHATASE 2C-LIKE PROTEIN 1 94 - -
Adu04g00796 323 ProSiteProfiles PPM-type phosphatase domain profile. 58 288 IPR001932 -
Adu04g00796 323 CDD PP2Cc 87 288 IPR001932 -
Adu04g00796 323 PANTHER PROTEIN PHOSPHATASE 2C 96 312 IPR015655 GO:0004722|GO:0006470
Adu04g00796 323 SMART PP2C_4 48 286 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu04g00796 Adu-Chr4 11254529 11256274 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu04g00796 1 323 PP2C-type Phosphatase Gene Family AT1G48040 48.831 2.13e-104 309
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu04g00796 K14803 - gmx:100798957 450.284
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu04g00796 04 11254529 11256274 Adu04g00796 04 11254529 11256274 ECH
Adu01g02500 01 94129659 94131944 Adu04g00796 04 11254529 11256274 PCT