Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu04g00771 ATGATCCAGTATGGTAAAGATTATGAATTTGATGCTCCAGTGAAGCTCCTAGAGAAACATCTACATGCTATGGCACAATCTGTTGATGAGCAACTTCTTGTTGTTTCTCAGGTTATTGCTTTCAATGATAAGCCTGTGAAGAATTTGAAGGGCTTGGTCACCATGGTTGAGAACTGTGATGATGAGTTTCTAAAGTTTGATCTGGAATACCAACAGGATGTGACAGCAACTAAAAGAAATGAATTTGAGGATTATTTTTTGAAGCGAGAGTTGCTCATGGGAATATATGAGAAGGGTTTTGAAAGGCCTTCTCCTATCCAAGAAGAAAGCATTCCAATTGCTCTTACTGGTAGTGACATTCTTGCAAGGGCTAAAAATGGGACAGGCAAAACAGCTGCATTTTACATTCCTGCATTGGAAAAAATTGACCAGAAACAATCTATCCTGGCATAG 453 0.3885 MIQYGKDYEFDAPVKLLEKHLHAMAQSVDEQLLVVSQVIAFNDKPVKNLKGLVTMVENCDDEFLKFDLEYQQDVTATKRNEFEDYFLKRELLMGIYEKGFERPSPIQEESIPIALTGSDILARAKNGTGKTAAFYIPALEKIDQKQSILA 150
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu04g00771 150 PANTHER DEAD-BOX ATP-DEPENDENT RNA HELICASE 6 71 147 - -
Adu04g00771 150 ProSiteProfiles DEAD-box RNA helicase Q motif profile. 80 108 IPR014014 GO:0003724
Adu04g00771 150 Pfam DEAD/DEAH box helicase 105 143 IPR011545 GO:0003676|GO:0005524
Adu04g00771 150 PANTHER DEAD-BOX ATP-DEPENDENT RNA HELICASE 50 71 147 - -
Adu04g00771 150 Gene3D - 37 83 IPR046449 -
Adu04g00771 150 Gene3D - 84 149 IPR027417 -
Adu04g00771 150 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 69 144 IPR027417 -
Adu04g00771 150 Pfam PDZ domain 37 74 IPR041517 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu04g00771 Adu-Chr4 10536864 10538756 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu04g00771 82 143 Eukaryotic Initiation Factors Gene Family AT5G11200 48.387 1.01e-14 68.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu04g00771 K12614 - ahf:112717194 281.182