Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu04g00769 ATGGGTGAAAGGTGTGACTTTCTTGAAGAAATCTCCACAAAAAGAGCAGATTGGATCATTAAGGTTTATGTTGTAAGGATGTGGTATGGTCCTCCACGCCCAAATAGTAGTGAAGCTGGTGCTTTAGAGATTGCATTGCACGACTTGAAGGGCAGCAGGATACACTGCACGATTCCAAAATCAGTGGTGCGACTGTTCCGGCCCATTCTGTCGGAGGGGCAGCTATATAGTATTTCTTCTTTTATAGTCCAAAAGAACAATATGTGGATGAAGTGCAGCTCGCTTCAGTATAGGATCACCTTATTACAAAGAAGCATGGTTGTTCATATCCCTCAACTGCTCTTTCCGTTTCAGCCATTTACATTTAGGAGTATTGCGTCTATCCTGCAAGAAGAAAGGCTTGATCAGAATTTTCTTTTTGATGTGCTAGCAGAGGTTATAGGGAAGGAGGACCCAAAGGATTTGGTTACCAAGCAAGGGCAGGAAAGCAAGCGGTTAGGGCTGTTAGTGGAGGACCTTGAGAAGAATTCTATCAGTTGTACCCTATTTGGTTCACTGGTAGATTTGATCCAACCCTATTTAGATGGTGATAAGACTGAACCTCTCATAGTTGCATTCCAACTATTTAGAGCAAAGGAATGGAATGGAAAGATTAGTATTCAGAGTAGTTTTGACACATCTAACATCCACATAAATCCCAATATTAAAGAGGCCGAACTATTTAAAAAGAGCACTCAAGGTGATAGTTGTTTTTCATCCCAGAGGATAAGTCATATGTCATCCAGTTCATATCGATCTGCTATTGATGAGCTCAGAAAAGGGATCTGCAAAGTTGAAACAATAGACAGTGTGTTGAATGCAAGTGATGTTGGGTTTAAATGGATACTATGTACGATTGTTGACTTTGATGTCGGGAGGAATGATTGGTTCTTCATAGCTTGCAAGTATTGTCATAAAAAATGCAAAAAGATAGAGGAGAGATTTGAATGTGACCATTGCCGCAAGAAGGCCGTTCAGGTAGACTTGCGGTATAAGCTTCAAGCTTATGTTTCCGATGCAACTGGAAGTATGTGTGTAGTGTTGTGGGATACCGAAGCAAGCCAAATTGTAGGGTTGAGTGCAAACAAAGTCAGAGAAACCTACAGTCAGGATGATTCTGATGATTCTTACCCGGAGGTGCTGAAGACGGCCTTGGACATGAAGTTGCTATTAAGGATTAATGTAAAAAGTAGTCATTTGAGTGGTAATGAGAACGTGTACAATGTCACAAAAGCTTGCTATGATGAGCACCTTATCCATAAATACAGCCAGTCTGTAAATGAACAATCTACGAAGGGGTTGGATAATGTTACTAGCTTGGATTGTACTACTGATGTTGTTTATCTTGGTGATGATGAATCTGTCCAAGGTGGACAAGAATCTGTCAATGAGTCTAAGACAGTTACCAGCAGCAAGGGAAGAGCTAAAAGGATTGATGCAGGAATTATAGGAGTAGTTGCGAAAGACTTGGAAAGTATACCCGTAGGGCAGTTGTCAAGTACTAAGAAGCCAAGGTTGAGTATTAAGAAAGAAAAGACTCTCTAG 1584 0.4085 MGERCDFLEEISTKRADWIIKVYVVRMWYGPPRPNSSEAGALEIALHDLKGSRIHCTIPKSVVRLFRPILSEGQLYSISSFIVQKNNMWMKCSSLQYRITLLQRSMVVHIPQLLFPFQPFTFRSIASILQEERLDQNFLFDVLAEVIGKEDPKDLVTKQGQESKRLGLLVEDLEKNSISCTLFGSLVDLIQPYLDGDKTEPLIVAFQLFRAKEWNGKISIQSSFDTSNIHINPNIKEAELFKKSTQGDSCFSSQRISHMSSSSYRSAIDELRKGICKVETIDSVLNASDVGFKWILCTIVDFDVGRNDWFFIACKYCHKKCKKIEERFECDHCRKKAVQVDLRYKLQAYVSDATGSMCVVLWDTEASQIVGLSANKVRETYSQDDSDDSYPEVLKTALDMKLLLRINVKSSHLSGNENVYNVTKACYDEHLIHKYSQSVNEQSTKGLDNVTSLDCTTDVVYLGDDESVQGGQESVNESKTVTSSKGRAKRIDAGIIGVVAKDLESIPVGQLSSTKKPRLSIKKEKTL 527
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu04g00769 527 Gene3D - 115 252 IPR012340 -
Adu04g00769 527 PANTHER REPLICATION PROTEIN A 70 KDA DNA-BINDING SUBUNIT A 45 422 - -
Adu04g00769 527 Gene3D - 258 436 IPR012340 -
Adu04g00769 527 SUPERFAMILY Nucleic acid-binding proteins 120 248 IPR012340 -
Adu04g00769 527 SUPERFAMILY Nucleic acid-binding proteins 291 426 IPR012340 -
Adu04g00769 527 CDD RPA1_DBD_A_like 20 99 - -
Adu04g00769 527 CDD RPA1_DBD_B_like 156 244 - -
Adu04g00769 527 SUPERFAMILY Nucleic acid-binding proteins 8 112 IPR012340 -
Adu04g00769 527 Gene3D - 6 109 IPR012340 -
Adu04g00769 527 Pfam Replication factor-A C terminal domain 306 418 IPR013955 -
Adu04g00769 527 PANTHER REPLICATION FACTOR A 1, RFA1 45 422 IPR004591 GO:0003677|GO:0005634|GO:0006260|GO:0006281|GO:0006310
Adu04g00769 527 Pfam Domain of unknown function DUF223 44 108 IPR003871 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu04g00769 Adu-Chr4 10525707 10528103 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu04g00769 1 408 Core DNA Replication Machinery Family AT5G08020 25.298 1.27e-18 87.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu04g00769 - - ahf:112716567 1014.22