Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu04g00720 ATGTTTCTTCAACTTGCGTTTGATATCATACTAACATTTCTATGCTTCGTACATACTCTGGAATCTGCACAAATCACAATCTCACCGAAGTGTGATTCCATGTGTGGAGAAGTTGAGATCCCTTACCCGTTTGGAATGAATGATCCCGCGTGCTATGCGGGTAAGTGGTTTGAAATAGAATGCTTGAACAAACCCATGAACAACGTTCCCACTCTCACCCCTTACCTGAAAGCCACAGACCTGGAAGTGAGTTCCATCGATGCGTCGCGCAGCACGGTTACTATATCGAGCTTGACCTTCACTTTGAACTGCCATGGCGATGGCGTCATTTCTGGGCCAGTCATACACCTGAGAGGGAGCCCCTTTGTGTACTCCCAAGAAAGAAACAAATTCGTGGCCATGGGCTGCAACCTTGTTACATATCTACTCTCAAACGCCGTACAAGTTGGCGCGTGCGCATCGATTTGCGACAGCAACGATGATATTTTCTTCCACAGCATATCCGGCAATTATTGCAGCGGTAAATATTGCTGTGAGTCTTCGTTGCCTTTGTACCTCTCAGAATTCAACGTTACTTCTGAAAGGCTCGCAGGAAAGAATAGGAGCCAATCGGACTGCAGTTATGCGATGATTATAGAAGAAGCTGTTTGGGAGTCGGAGAGTGCTGAGCTGGCAGACTTAACCAATTTAAAATTCACCGCGGTGCTTGCGTGGGAGATTGTGGACTCAAGTTTGGAACTGCCTGATAACTGCCAAAACAGTTATATCACATCTTCGGAACGGAGTCACTCAGGTCGCACATGTAATTGCTACGACGGTTTCGTTGGCAATCCTTACATTCCGGGAGGCTGTATTAAAGTTATTAAAGGGATATCTTCAAATTCAACAATTTTGGCAAGCGTCGTAGGATCCATCATATTACTCCTTCGTTCGTGGTGGTTGCATAAAGTTGTAAGAAAAAGAGTAGCAAAGAAACGCAAAGAAAAAAACTTCAAACAAAATGGAGGATTGTTGCTACAACAGAGATTGTCCACGGGTGAAGTTAGTGTTGAAAAAGTTAAACACTTGAGCCTGAAGGATTTGGAGAAAGCCACAGACAGCTTTAATGTGAACAGAGTACTTGGAAAAGGAGGCCAAGGTACTGTCTACAAGGGCATGCTTGTTGATGGTCAAATTGTAGCAGTTAAAAAGTTCAAAGTTGAGGGAAATGTTGAAGAATTCATCAACGAATTCGTCATTCTTTCACAAATTAACCATAGAAATGTGGTTAAGTTGTTAGGGTGTTGTTTGGAGACAGAAATTCCTCTGCTTGTTTATGAATTCATTCCTAATGGTAATCTCTTCCAATATTTGCATGACCAAAATGAGGACTTACCAATGACATGGGAAATGCGTTTGAGAATTGCCACTGAAGTTGCAGAAGCTATATTTTATTTACACTCTGCTGCTTCTCAACCCATTTATCATAGAGATGTGAAATCAACAAATATTTTGTTGGATGGAAAGTACAGAGCAAAAGTAGCTGATTTTGGAGCATCTAAAATGATTTCTCTTGAAGATACTCACCTCACAACCGCAGTTCAAGGAACCTTTGGCTATTTAGATCCCGAATACTTTCATACAAGTCAATTAACAGAGAAAAGTGATGTGTATAGTTTCGGAGTAGTTCTTGTCGAGCTTCTAACCGGACAAAAACCAATATCATCGTCGAGAACGGAAGAAGCCAAAAGTTTGTCTCATTATTTTCTTTGTTCTATGGAGGAAAATCGTGTATTTGATATCATTGACGAAAGGGTGACAAAAGAGGGGGAGAAAGAGCATATAATTGCAGTTGCTAATCTTGCATATAAGTGCTTGGAGTTAAATGGGAGAAAAAGACCTAGTATGAAAGAAGTTGCAAGTGAACTATATAGGATCTTGAAATTGGAAATGAAGCCTAGCACACAACAAAACATTGAAGAAACTGAGTTTGCTGGAATTGAAGAATATCAATCTTGGGCTGCATCTTCTGTTTCTGATACAGGTTCAAATTCAACTCTAAGCAACACAATACCCACTTCAAAGTCAGAGATAATAATGCCTATTTTCTTCAAATAA 2097 0.4072 MFLQLAFDIILTFLCFVHTLESAQITISPKCDSMCGEVEIPYPFGMNDPACYAGKWFEIECLNKPMNNVPTLTPYLKATDLEVSSIDASRSTVTISSLTFTLNCHGDGVISGPVIHLRGSPFVYSQERNKFVAMGCNLVTYLLSNAVQVGACASICDSNDDIFFHSISGNYCSGKYCCESSLPLYLSEFNVTSERLAGKNRSQSDCSYAMIIEEAVWESESAELADLTNLKFTAVLAWEIVDSSLELPDNCQNSYITSSERSHSGRTCNCYDGFVGNPYIPGGCIKVIKGISSNSTILASVVGSIILLLRSWWLHKVVRKRVAKKRKEKNFKQNGGLLLQQRLSTGEVSVEKVKHLSLKDLEKATDSFNVNRVLGKGGQGTVYKGMLVDGQIVAVKKFKVEGNVEEFINEFVILSQINHRNVVKLLGCCLETEIPLLVYEFIPNGNLFQYLHDQNEDLPMTWEMRLRIATEVAEAIFYLHSAASQPIYHRDVKSTNILLDGKYRAKVADFGASKMISLEDTHLTTAVQGTFGYLDPEYFHTSQLTEKSDVYSFGVVLVELLTGQKPISSSRTEEAKSLSHYFLCSMEENRVFDIIDERVTKEGEKEHIIAVANLAYKCLELNGRKRPSMKEVASELYRILKLEMKPSTQQNIEETEFAGIEEYQSWAASSVSDTGSNSTLSNTIPTSKSEIIMPIFFK 698
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu04g00720 698 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 19 678 IPR045274 GO:0007166
Adu04g00720 698 ProSitePatterns Serine/Threonine protein kinases active-site signature. 487 499 IPR008271 GO:0004672|GO:0006468
Adu04g00720 698 SMART serkin_6 368 637 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu04g00720 698 Gene3D Phosphorylase Kinase; domain 1 329 441 - -
Adu04g00720 698 Gene3D Transferase(Phosphotransferase) domain 1 442 663 - -
Adu04g00720 698 Pfam Protein kinase domain 369 634 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu04g00720 698 ProSiteProfiles Protein kinase domain profile. 368 640 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu04g00720 698 Pfam Wall-associated receptor kinase galacturonan-binding 31 96 IPR025287 GO:0030247
Adu04g00720 698 CDD STKc_IRAK 374 639 - -
Adu04g00720 698 SUPERFAMILY Protein kinase-like (PK-like) 350 637 IPR011009 -
Adu04g00720 698 PANTHER WALL ASSOCIATED KINASE-LIKE PROTEIN 19 678 - -
Adu04g00720 698 Pfam Wall-associated kinase 171 270 IPR013695 GO:0004674|GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu04g00720 Adu-Chr4 9770067 9773951 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu04g00720 31 694 Receptor kinase-like Gene Family AT1G16260 43.652 3.41e-173 510
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK Adu04g00720 Pkinase 6e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu04g00720 - - ahf:112796208 943.34