Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu04g00703 ATGAGTTCTTCAGTGACAGGAGCTGCTGGATCTGGTGATGATGGAAGAAGTAGTAACAACAAAGGAAAAAGACCTGCCTACAAACGCCTTACTTCTGCTCAAACAGCTAAACTTGAAAAGTACATTATTGATTGTCCTCATCCTGATGAAGCTCAACGAAGGCAACTTGCTGAGGAGGTTGGGATAGAGCCAAAACAAGTCAAGTTTTGGTTTCAGAATAAGAGAACTCAAATAAAGAATCAACATGAGCGAGCAGATAACAATGCTCTTCGGGCTGAGAATGAAAGGATACAAAACGAGAATCTCCTAATGAAAGAGGCACTTAATAATATACTTTGCCCTTCTTGTGGGGGCCCACCTGCCGCTGGTGAAGACCATGAACACTTCATGCAGAAAATGCTTCTTGAAAATGCCCACCTTAAGGAAGAGGCAAGCCTAAACTCCTTCAACACATCCTCTTTTCAACATCATGGGAAAATATCAAACATTCTTTCAAGGTACTTGGAGAAAGAGGTGCTACACCCTGAAGATATAGAGCAGCTAAACGCAATTCCGAACAACATAGACATTGCGGGGTCATCATCAACAACACCACTGTATGATTTCTCAGTTGCAAATGGAACCTTGTTGAACCAACAACAAGGGGTTAGCATCAATGATGTTGTTGCAGGCCCTTCTTCTTCACTACTTCATCATCAGAACTATGTTCCACCACCAATTGTTGCTGATAATAATAATAATGGGGAACAAGGTGTGGCAGTAATGGAGGTTGCATTGGCCTCCGAGGTTGCGGCTACCGCCATGGATGAACTGCTTAGGCTTATTCGCCTCAATGAACCGTTCTGGGTTGGTTCTGCTTTTGATGGGAAGCTTGTGCTTCACGGTGAAAGCTACGAAAAGATGTTCCCTAGGGTTTATCAATTCAACGATGGAAACTCTCGTGTTGAATCATCAAAGGAATCAGGGATTGTCAACATAAGTGGGATTCAACTGGTTGATTTGTTTCTTGATTCGGAAAAATGGGCGAATGCTTTTCCAACAATAGTTACAAAAGCGCAGACACTTGAAGTCTTTGAAATTGGATTGCCAGAAAGTCGAAGCGGAGCCTTACAATTGATGTATGAAGAGATGCACGGGTTTTCACCATTGGTGGCATCTCGTGAATTCCAATTCCTCCGGCACTGCCATCAACTGGAGCCTGGATCGTGGATCATAACAGATGTGTCTTTCGATTCGCTTCGAAACTACCCCTTTCGCCTTCCTCGCTCTCGCTCTTGGAGACGTCCCTCTGGATGCTTGATCCAGGAACTCCCCAACTCCACTTCTTGCATGGTTACTTGGATCGAACACGTGGAAGTGGATGATAAGATTCAGACTCACCGGCTTTACAGAGATCTTGTTAGCACCAATGCTGCATATGGAGCACAGAGATGGATTATGGAACTTCAAAGAATGTGCCTCAGATCTATGAGCTATGCTCTTGAAAACATACCTGATCATGAATATGGTGGAGTGATAAATACAAATGAAGGAAGGAGGAGTGTGATGAGGCTAGGTCAGAGGCTGGTGAGGCTATTTAGTGAGAATTTGAACATGAGTGGAAAGGTGGAGTTTCCGCAGTTGAGTGTGGAGTACAACAGTGGGGTGAGGATCTCAGCTCGAAGATGCACAGAGAAAGGGCAGCCAAATGGGACCATTGTGATTGCTGCAACGTCTCTTTGGCTGCCTCTCCATTACCACACAGTGTTTGAATTCTTGACTGATATCAACAAACGCTCTCAGTGGGATGTTCTTTTCTGCACAACTCCAGTCCACTACATTGCACACATCTCAAATGGAACTCATCCTGCCAACAATACATCAATTATCCAGCCATTCATGTCAAGCGAGAACAATGCCGTTATAATTCAAGAAAGCTTCATAGACCCAGTGGGATCATCTTACATAGTGTATGCTCCAGCTGACGTGGAAGCCATCCACGTCGCCATTAGCGGCGAGGACTCTTCCACCATCCCTATCCTTCCCTCAGGATTTGTTGTGTGTGGAGATGGCAGAGCATCAATGATGAGCAACAGCACCATTATTGCACCATCGGTTCTTGGTGGAGTTGGAAGCTATGGCTATCAGCATAGATCAGAAGGAGGGTCACTGTTGACGGTGGCATTCCAAATTCTGGTTAATACCATCACTTGTGGACCCAACCTAGTGAATATGGAATCTGTGGATTCTATTAACACCCTTTTGACTTCAACCGTCCAGAAGATCAAGGACGCTTTGAACTGCAATGCCTTGCACTGA 2298 0.4473 MSSSVTGAAGSGDDGRSSNNKGKRPAYKRLTSAQTAKLEKYIIDCPHPDEAQRRQLAEEVGIEPKQVKFWFQNKRTQIKNQHERADNNALRAENERIQNENLLMKEALNNILCPSCGGPPAAGEDHEHFMQKMLLENAHLKEEASLNSFNTSSFQHHGKISNILSRYLEKEVLHPEDIEQLNAIPNNIDIAGSSSTTPLYDFSVANGTLLNQQQGVSINDVVAGPSSSLLHHQNYVPPPIVADNNNNGEQGVAVMEVALASEVAATAMDELLRLIRLNEPFWVGSAFDGKLVLHGESYEKMFPRVYQFNDGNSRVESSKESGIVNISGIQLVDLFLDSEKWANAFPTIVTKAQTLEVFEIGLPESRSGALQLMYEEMHGFSPLVASREFQFLRHCHQLEPGSWIITDVSFDSLRNYPFRLPRSRSWRRPSGCLIQELPNSTSCMVTWIEHVEVDDKIQTHRLYRDLVSTNAAYGAQRWIMELQRMCLRSMSYALENIPDHEYGGVINTNEGRRSVMRLGQRLVRLFSENLNMSGKVEFPQLSVEYNSGVRISARRCTEKGQPNGTIVIAATSLWLPLHYHTVFEFLTDINKRSQWDVLFCTTPVHYIAHISNGTHPANNTSIIQPFMSSENNAVIIQESFIDPVGSSYIVYAPADVEAIHVAISGEDSSTIPILPSGFVVCGDGRASMMSNSTIIAPSVLGGVGSYGYQHRSEGGSLLTVAFQILVNTITCGPNLVNMESVDSINTLLTSTVQKIKDALNCNALH 765
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu04g00703 765 SUPERFAMILY Bet v1-like 260 487 - -
Adu04g00703 765 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 19 761 IPR042160 -
Adu04g00703 765 Gene3D - 292 476 IPR023393 -
Adu04g00703 765 SUPERFAMILY Bet v1-like 546 756 - -
Adu04g00703 765 MobiDBLite consensus disorder prediction 1 16 - -
Adu04g00703 765 ProSitePatterns 'Homeobox' domain signature. 56 79 IPR017970 GO:0000981|GO:0006355
Adu04g00703 765 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN HDG10-RELATED 19 761 - -
Adu04g00703 765 Pfam START domain 262 487 IPR002913 GO:0008289
Adu04g00703 765 ProSiteProfiles START domain profile. 253 491 IPR002913 GO:0008289
Adu04g00703 765 SUPERFAMILY Homeodomain-like 17 86 IPR009057 -
Adu04g00703 765 CDD START_ArGLABRA2_like 258 486 - -
Adu04g00703 765 Gene3D - 11 98 - -
Adu04g00703 765 SMART HOX_1 23 85 IPR001356 GO:0003677
Adu04g00703 765 SMART START_1 262 488 IPR002913 GO:0008289
Adu04g00703 765 Coils Coil 75 110 - -
Adu04g00703 765 CDD homeodomain 21 82 IPR001356 GO:0003677
Adu04g00703 765 Pfam Homeodomain 27 79 IPR001356 GO:0003677
Adu04g00703 765 ProSiteProfiles 'Homeobox' domain profile. 21 81 IPR001356 GO:0003677
Adu04g00703 765 MobiDBLite consensus disorder prediction 1 29 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu04g00703 Adu-Chr4 9302964 9308064 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu04g00703 23 760 Homeobox Transcription Factor Family AT1G73360 40.483 3.18e-180 531
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Adu04g00703 START 4.2e-32 CL0209
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu04g00703 K09338 - gmx:100795075 788.875