Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu04g00690 ATGAACATGATGAAGCTCTTTAGCCTTGTAGTGTTGTCCTTATCTTTCTTCACAGTTATGGGGCAACTACCTTCCCAGGACATTTTGGCATTGTTGGAGTTCAAGAAAGGCATCAAGCATGACCCTACTGGTTATGTTCTCAATTCATGGAATGAGGAATCCATTGACTTTGATGGATGCCCTTCTTCATGGAATGGAGTTCTTTGTAATGCTGGTAATGTTGCTGGGGTTGTGCTTGATAATCTAGGTCTCTCTGCTGATGCTGACTTGAGTGTATTTTCAAACCTCACAAAGCTTGTTAGGCTCTCCATGTCCAATAACTCGATTTCAGGAAAACTACCTGGCAACATTGGTGATTTAAAAAGCCTTGAGTTTCTGGATATCTCCAATAACCTCTTTTCTTCGTCGTTGCCATCAGGAGTTGGCAGCTTAGGTAGCTTGCAGAATCTGTCCTTGGCTGGGAATAACTTCTCTGGCCGGATACCTGACTCGATTTCGGCAATGGCTTCCCTCCAGTCTTTGGACCTGAGCCGCAACTCCTTTTCTGGAGTGCTGCCAGTATCTTTGACTAAGCTGGCTAACTTGGTATCTCTTAACTTGTCTCATAATGGCTTCACTGGGAAAATTCCCAAAGGTTTTGAGCAGATGTCCACTCTTGAAAACCTTGACTTGCATGCCAATCTGCTTGATGGTCATTTAGATGTTGAATTTATGCTTTTATCAAGTGCCAGCTATGTTGATTTCAGTGAGAATATGCTAGAGAGTGATAATTCTGAGAAGTTTCTACAACGGATATCTGAAAGTATTAAGCATTTGAATCTAAGCCACAACCGGTTTACTGGATCACTGGATGGTGGAGCCGAGCTACCGGTTTTCGAAAATGTGAAGGTGTTGGACCTCAGCTACAATCAATTGGATGGAGAATTGCCTGGATTTGATTTTGTTTATGATCTTGAGGTCCTTAAGCTTAGCAACAACCGATTTTCAGGATTTATTCCTATTGGCCTTCTAAAGGGAGACTCTTTGGTTTTAACTGAACTGGATTTGAGTGCCAACAATCTCACAGGGACACTGAGTATAATTACATCAACTACACTGCACTATCTTAATCTCTCATCAAATGGCTTCAGTGGCGAGCTGCCCTTGCTGACTGGAAGCTGTGCTATACTCGATCTGTCGAAGAACAGATTAGAAGGAAATTTAACCAGGATGTTGAAATGGGGGAATCTAGAATTTCTTGATCTCAGTGGAAACCGTTTGACAGGGAACATACCTGAGGCAACTCCTCAATTTTTGCGGTTAAATTATTTGAATCTGTCCAGCAATTCTCTTAGCAGCTCCCTTCCAAGAGTATTAACTAAATATCCAAAGCTTAGAGTGCTTGATATTAGTTCAAACCAAATCAATGGACAACTTGAAGCCGAATTGCTTGCAATGCCAACTTTGCAAGAGCTCCATCTTGAAAATAATATGATCACTGGTGGTGTTAGTTTCTCATCTTCTCCTGGTCAATCAGATCTTCAGATTCTTGATCTCTCTCATAACAAGTTTAATGGCTATTTTCCCGACGAGTTTTGGTCTCTAAATGGCCTCGAAGTGCTCAATATTGCCGGAAATAACTTTTCTGGTTCTCTTCCAACTGCAATTGCTGACATGAGTTCACTATACTCCTTGGATATATCAGAAAATCATTTTACTGGGCCTCTGCCAAATAACATCCCAAAGGAGCTCACAAACTTCAATGCTTCACTGAATGATTTTTCTGGAGTTGTTCCGGAAAGTCTTAGGAAATTCCCTAATTCATCTTTCTTTCCTGGGAATTCCAAGTTACATCTTCCTACTAGCCTTCCTGGATCAACCACTCCACCAGCTGAAAGTTCCAAGAAGAAGTCCATGAGCACCATTGTTAAAGTAATAATCATAGTGTCATGTGTTGTTGCTATCTTCATATTAGTCTTGCTTGCAGTCTTCATACTCTACATCCGTAAGGCAAGATCTCCACCGGAATATGAAACAAGTAAGGATATCCATGCTCGTCCACAGCCAGTCAGCTTGGCTCCGGTTCGTGCCACAGACAGGGGTGGTCCTTTGGTTGTATCAGCCGAGGACCTTGTGACATCCCGGAAAGAATCACCATCAGAGATAATCAGCCCGGATGAAAAATTGGCAGCAGTAACCGGGTTCTCCCCCTCAAAACAAAGCCACTTTTCCTGGTCACCAGAGTCAGGTGATTCATATACTGCTGAAAATCTTGCAAGACTAGATACAAGATCACCAGATAGGTTGGTTGGAGAGCTGCATTTTCTTGATGATACAATATCTTTGACACCTGAAGAGCTCTCTCGGGCCCCGGCTGAAGTTTTGGGGAGGAGCAGTCATGGAACTTCTTACAAGGCAACTTTGGAGAATGGCTTGTTCTTGAGAGTGAAGTGGCTAAGAGAAGGAGTGGCAAAACAGAGAAAAGAGTTTGTTAGAGAGATAAAGAAATTTGCAAACATAAGGCATCCAAATGTTGTGGGATTGAGAGGATACTATTGGGGTCCTACCCAGCACGAGAAACTCATTCTTTCGGATTACATCTCTCCGGGAAGCCTTGCAAGTTTTCTTTATGATCGACCAGGAAGAAAAGGTCCACCATTAACTTGGGTGCAAAGGCTCAAGATTGCAGTTGATGTAGCCCGTGGTTTGAACTATCTCCATTTTGATCGCGCCGTTCCTCACGGGAACCTAAAAGCCACAAATGTGTTGTTAGATACTGGTGATATGAATGCTCGTGTAGCTGATTATTGCCTTCACCGGCTTATGACACAGGCTGGTACTGTTGAACAGATTCTTGATGCTGGTGTCTTAGGCTACCGTGCACCTGAGTTAGCTGCTTCCAAGAAGCCAATTCCATCCTTCAAATCAGATGTTTATGCTTTTGGAGTGATACTCTTGGAACTTCTAACTGGAAGGTGTGCTGGTGATGTGATTTCTGGTGAGGAGGGAGGTGTTGATTTGACAGAATGGGTGAGGTTGCGTGTGTCCGAAGGTCGAGGCTCGGATTGTTTTGATGCTACCTTGATGCCGGAACTGAGCAATCCGGTTGTGGAAAAGGGAATGAAGGAGGTCCTTGGAATAGCTATCAGATGCATCCGATCTGTTTCGGAGAGGCCAGGCATCAAGACTATATATGAAGAGCTTTCTGCTATATAA 3195 0.4316 MNMMKLFSLVVLSLSFFTVMGQLPSQDILALLEFKKGIKHDPTGYVLNSWNEESIDFDGCPSSWNGVLCNAGNVAGVVLDNLGLSADADLSVFSNLTKLVRLSMSNNSISGKLPGNIGDLKSLEFLDISNNLFSSSLPSGVGSLGSLQNLSLAGNNFSGRIPDSISAMASLQSLDLSRNSFSGVLPVSLTKLANLVSLNLSHNGFTGKIPKGFEQMSTLENLDLHANLLDGHLDVEFMLLSSASYVDFSENMLESDNSEKFLQRISESIKHLNLSHNRFTGSLDGGAELPVFENVKVLDLSYNQLDGELPGFDFVYDLEVLKLSNNRFSGFIPIGLLKGDSLVLTELDLSANNLTGTLSIITSTTLHYLNLSSNGFSGELPLLTGSCAILDLSKNRLEGNLTRMLKWGNLEFLDLSGNRLTGNIPEATPQFLRLNYLNLSSNSLSSSLPRVLTKYPKLRVLDISSNQINGQLEAELLAMPTLQELHLENNMITGGVSFSSSPGQSDLQILDLSHNKFNGYFPDEFWSLNGLEVLNIAGNNFSGSLPTAIADMSSLYSLDISENHFTGPLPNNIPKELTNFNASLNDFSGVVPESLRKFPNSSFFPGNSKLHLPTSLPGSTTPPAESSKKKSMSTIVKVIIIVSCVVAIFILVLLAVFILYIRKARSPPEYETSKDIHARPQPVSLAPVRATDRGGPLVVSAEDLVTSRKESPSEIISPDEKLAAVTGFSPSKQSHFSWSPESGDSYTAENLARLDTRSPDRLVGELHFLDDTISLTPEELSRAPAEVLGRSSHGTSYKATLENGLFLRVKWLREGVAKQRKEFVREIKKFANIRHPNVVGLRGYYWGPTQHEKLILSDYISPGSLASFLYDRPGRKGPPLTWVQRLKIAVDVARGLNYLHFDRAVPHGNLKATNVLLDTGDMNARVADYCLHRLMTQAGTVEQILDAGVLGYRAPELAASKKPIPSFKSDVYAFGVILLELLTGRCAGDVISGEEGGVDLTEWVRLRVSEGRGSDCFDATLMPELSNPVVEKGMKEVLGIAIRCIRSVSERPGIKTIYEELSAI 1064
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu04g00690 1064 Pfam Leucine rich repeat 409 468 IPR001611 GO:0005515
Adu04g00690 1064 Pfam Leucine rich repeat 480 541 IPR001611 GO:0005515
Adu04g00690 1064 Pfam Leucine rich repeat 146 204 IPR001611 GO:0005515
Adu04g00690 1064 Pfam Leucine Rich repeat 363 379 IPR001611 GO:0005515
Adu04g00690 1064 ProSiteProfiles Leucine-rich repeat profile. 409 431 IPR001611 GO:0005515
Adu04g00690 1064 Gene3D Ribonuclease Inhibitor 145 216 IPR032675 -
Adu04g00690 1064 Gene3D Ribonuclease Inhibitor 26 144 IPR032675 -
Adu04g00690 1064 SMART LRR_typ_2 315 339 IPR003591 -
Adu04g00690 1064 SMART LRR_typ_2 168 191 IPR003591 -
Adu04g00690 1064 SMART LRR_typ_2 96 119 IPR003591 -
Adu04g00690 1064 SMART LRR_typ_2 431 454 IPR003591 -
Adu04g00690 1064 SMART LRR_typ_2 192 215 IPR003591 -
Adu04g00690 1064 SMART LRR_typ_2 120 144 IPR003591 -
Adu04g00690 1064 SMART LRR_typ_2 528 551 IPR003591 -
Adu04g00690 1064 Gene3D Phosphorylase Kinase; domain 1 773 859 - -
Adu04g00690 1064 SUPERFAMILY RNI-like 294 598 - -
Adu04g00690 1064 PANTHER - 9 1064 - -
Adu04g00690 1064 Gene3D Transferase(Phosphotransferase) domain 1 861 1064 - -
Adu04g00690 1064 SUPERFAMILY L domain-like 46 381 - -
Adu04g00690 1064 PANTHER OS07G0626500 PROTEIN 9 1064 - -
Adu04g00690 1064 Pfam Protein tyrosine and serine/threonine kinase 786 984 IPR001245 GO:0004672|GO:0006468
Adu04g00690 1064 Pfam Leucine rich repeat N-terminal domain 25 70 IPR013210 -
Adu04g00690 1064 ProSiteProfiles Protein kinase domain profile. 782 1064 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu04g00690 1064 SUPERFAMILY Protein kinase-like (PK-like) 785 1059 IPR011009 -
Adu04g00690 1064 Gene3D Ribonuclease Inhibitor 237 619 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu04g00690 Adu-Chr4 9139316 9144171 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu04g00690 27 1012 Receptor kinase-like Gene Family AT4G36180 28.678 2.80e-85 298
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Adu04g00690 PK_Tyr_Ser-Thr 2.8e-28 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu04g00690 - - gmx:100793639 1733