Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu04g00688 ATGTGGAGGGTTCTTGGGGTAGGACACTCTTATTTACTGATTCTGATGATGTTAGTCTCAGTGAGATTGAGCATTGTTGAGGCTCAAAAAAAGTCCTTTCTCATAAATTGTGGTTCAAACTCTTCTGTGAATGTGGATGGTAGAAGATGGGTTGGGGATATGAACCCTAATAATAATGTCACTCTTAGTTCCCCTGGTGTTGCAGTATCCACCTCTCCATTGAGTGGAATTTCTATCTATGATTCACTCTACAAAACAGCCAGGATTTTCACTGGTTCTTTGAATTACACAATCAAAGATCTTCAAGGGAACTATGTTCTTAGGTTCCATTTTTCTCCCTTTGTGGATGTTGAGGACTACAATGTGAATAAGTCCTCATTTAGTGTGGTGGCTAATAGTCTGAAACTACTCTCTGAGTTCAATGTTCCGGAGAAGATTTCGCAGTTGCAGAATTCAGGAAAGAATTCTAGTTCATTCTCCTTGATTAAGGAGTACCTTTTTGATATCAGTGCAGAGCTTGTGATTGAGTTTGTTTCAACTGGAAACTCCTTTGGATTTGTCAATGCCATTGAAGTTGTCCCAGTTGTGGACGAGCTCTTTGCCAGCTCAGTCAGGAAAGTTGGTGGTGGAAACTTGAATGTGATGGGACGTGGAATGGAGACTATGTATAGATTAAATGTTGGTGGTCCTGAGATTCAACCTGATCAAGATCCTGATCTTTGGAGAACTTGGGAAATGGATTCTGGCTATATGATCACACAAAATGCTGGCATAGGAATTAACAACAGTTCCAATATCACTTATGCTTCTGCAAATGATACTTCAGTAGCTCCTCTACTTGTATACGAAACAGCAAGGGCAATGTCAAACACAGAAGTCTTGGACAAGAGATTTAACATGTCCTGGAAATTCGAAGTGGATCCCGATTTTGATTATTTGGTCCGGCTACATTTCTGCGAGTTGGTTTATGATAAGGCGAACGAGAGGATTTTCAAGATCTACATAAACAACAGGACTGCTGCAGATAATGTTGATGTTTATGTTCAAGCAGGAGGGAAGAATAAAGCATATCACCTGGACTATTTCGACGCCATGTCTTTGAGCATTGACACATTATGGGTTCAACTAGGTCCTGATGCAGGTGCTGGTGCTGCGGGAACTGATGCTCTCTTGAATGGACTAGAGATTTTCAAGCTTAGTCGAAATGGGAATCTAGCCTATGTCGATAAACATGACTCAGCTGGCAATGCAGCAAGCAAATCAAAAGTTCTTTGGGTTGGAATTGGAGCAGGTCTAGCTTCTATTGCTGTAATTGCAGTTATAGTTATTCTTGTTTTCTGTTTCTGCAGAAGCCAGAAGAACAAATCAAGTGACACGAAAAACAATTCTCCTGGTTGGCGACCTTTGTTCCTTGTTGGGGCGGCTGTGAACAGCACCATGGCCGCGAAGGGATCATCAGGAAGTCAAAAAGCATATGGATCTGTGATCTCAACAAGAGCTGGCAAGCACTTTACATTGGCTGAAATCATTGCTGCCACAAAAAATTTTGATGAGAGCTTGGTAATTGGAGTTGGAGGCTTTGGTAAGGTGTACAAGGGGGAGATTGATGGTGGTGTCCTTGCTGCGATCAAGCGATCCAACCCGCAATCTGAGCAAGGCTTGGCTGAATTTGAGACAGAAATTGAGATGCTCTCCAAACTCAGGCATAGGCATCTTGTGTCATTGATTGGTTTCTGTGAAGAAAAAAATGAAATGATTCTGGTTTATGAGTATATGTCCAATGGAACTCTTAGAAGCCACTTGTTTGGGAGTGATCTTCCCCCATTAACTTGGAAGCAGCGTCTCGAGGTGTGCattggcgctgctaggggacttcactacctacatacaggagccgagcgtggtataattcacagggatgtcaagacaaccaacatattgctggatgagaactttgtagccaaaatggccgattttggtttgtcgaaagATGGACCGGCTTTGGACCATACTCATGTTAGTACAGCTGTGAAGGGAAGCTTTGGCTATCTAGACCCGGAGTACTTCAGGAGACAGCAGTTGACCGAGAAATCGGATGTGTACTCATTTGGGGTTGTGTTGTTTGAAGTTGTTTGTGCTAGAGCTGTGATCAACCCAACCTTGCCTAAAGATCAGATCAATCTTGCAGAATGGGCAATGAGATGGCAAAGGCAAAGATCAATTGAAACAATCATTGATCCTCATCTTAGAGGAAACTATTGTCCCGAATCCTTGGCGAAGTTTGGGGAGATAGCCGAGAAATGTCTCGCGGACGATGGGAAGAGCAGGCCAACTATGGGGGAGGTGTTGTGGCACTTAGAATATGTGTTGCAGCTACATGAAGCTTGGTTGAACAGGGACAGTATTGTAACTTCCTTCTCAAGTAGCCAAGATTTGAGAGGTGCAAAAGATGGAGGACTAGAATTGGTGCACGAGTCTTCAAGTCAAGATGAAGAAAATGAATGA 2505 0.404 MWRVLGVGHSYLLILMMLVSVRLSIVEAQKKSFLINCGSNSSVNVDGRRWVGDMNPNNNVTLSSPGVAVSTSPLSGISIYDSLYKTARIFTGSLNYTIKDLQGNYVLRFHFSPFVDVEDYNVNKSSFSVVANSLKLLSEFNVPEKISQLQNSGKNSSSFSLIKEYLFDISAELVIEFVSTGNSFGFVNAIEVVPVVDELFASSVRKVGGGNLNVMGRGMETMYRLNVGGPEIQPDQDPDLWRTWEMDSGYMITQNAGIGINNSSNITYASANDTSVAPLLVYETARAMSNTEVLDKRFNMSWKFEVDPDFDYLVRLHFCELVYDKANERIFKIYINNRTAADNVDVYVQAGGKNKAYHLDYFDAMSLSIDTLWVQLGPDAGAGAAGTDALLNGLEIFKLSRNGNLAYVDKHDSAGNAASKSKVLWVGIGAGLASIAVIAVIVILVFCFCRSQKNKSSDTKNNSPGWRPLFLVGAAVNSTMAAKGSSGSQKAYGSVISTRAGKHFTLAEIIAATKNFDESLVIGVGGFGKVYKGEIDGGVLAAIKRSNPQSEQGLAEFETEIEMLSKLRHRHLVSLIGFCEEKNEMILVYEYMSNGTLRSHLFGSDLPPLTWKQRLEVCIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMADFGLSKDGPALDHTHVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLAEWAMRWQRQRSIETIIDPHLRGNYCPESLAKFGEIAEKCLADDGKSRPTMGEVLWHLEYVLQLHEAWLNRDSIVTSFSSSQDLRGAKDGGLELVHESSSQDEENE 834
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu04g00688 834 ProSiteProfiles Protein kinase domain profile. 516 788 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu04g00688 834 Pfam Protein tyrosine and serine/threonine kinase 521 783 IPR001245 GO:0004672|GO:0006468
Adu04g00688 834 Gene3D Phosphorylase Kinase; domain 1 476 591 - -
Adu04g00688 834 MobiDBLite consensus disorder prediction 810 834 - -
Adu04g00688 834 SUPERFAMILY Protein kinase-like (PK-like) 493 788 IPR011009 -
Adu04g00688 834 Gene3D Transferase(Phosphotransferase) domain 1 592 805 - -
Adu04g00688 834 Gene3D - 218 400 - -
Adu04g00688 834 Gene3D - 28 195 - -
Adu04g00688 834 CDD STKc_IRAK 522 787 - -
Adu04g00688 834 SMART serkin_6 516 789 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu04g00688 834 PANTHER OS07G0166700 PROTEIN 22 831 IPR045272 GO:0004714|GO:0006468
Adu04g00688 834 Pfam Malectin-like domain 35 398 IPR024788 -
Adu04g00688 834 ProSitePatterns Protein kinases ATP-binding region signature. 522 544 IPR017441 GO:0005524
Adu04g00688 834 PANTHER OSJNBA0058K23.13 PROTEIN 22 831 - -
Adu04g00688 834 MobiDBLite consensus disorder prediction 817 834 - -
Adu04g00688 834 ProSitePatterns Serine/Threonine protein kinases active-site signature. 636 648 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu04g00688 Adu-Chr4 9124916 9128454 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu04g00688 11 817 Receptor kinase-like Gene Family AT1G30570 64.137 0.0 1086
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Adu04g00688 Malectin_like 9.9e-33 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu04g00688 - - gmx:100791403 1307.74