Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu04g00606 ATGGAATCCGGTGGTGACGGCCGCGGTCACGGCGGAAGAGGGCTACGCCGCCAACAACGACAGCCGGAGCTCAATCTTCAACCACAATGGCGTCGTCCCTTAACATCACCCACAACCTCACACTCAAACATCACTCTCCAACCCCAATGGCGACGATCGACGCAACCGCCGCCAGCAGCCCTTCCTTCTCACCCTCAGTATTCTGCCACCGCCGCTGAACAACCGCGTGAGCTCCTTCTCCAACCAGAATGGCGCCGCCCGAGGCCCCCGACGACGACAACAACTTCTTCTCCGGAACCGGAACCGGCACGGAGGCTACCGAGGCCCACTTCTTCGTTCTGGAACCAGAATCAGTATTCTCCGAAGCCGCAGAGCTCGAGTTCCGGCAGTGAAGGTTCTAGAACTTCCAGCGCTGCTGACCATGCTGACTTTTGGCGACTTCCCTCAGATTCTCAAGCTCCCAAACTAGAAAGACTGCAAATATCCAGACAGTTTGCTACCCCATGTAGTACCCTCGAAAGGAAGGATAAGCTTTCACCTATTCGGAGACCCGACAATGGTGGCACATTGGCAATTCTAACTAACAAACTCCGTGTTAATCATTTCCTTGTGAAGTTAAATCCAGAGAGTGTAATAATGCATTACAATGTTGGCGTTAAACCAAAGTTTCCCTCAAAGCATGGCCGGCCTCAGAAATTATCAAAATCTGATCTGTCCATGATTAGAGATAAATTGTTTTCTGATGATCCAGAGAGATTACCCTTGGATATGACTGCATATGATGGTGCAAAGAATATCTTTAGTGCAATACAATTACCGGAAGAAACCTTTACTGTGGAGCTTTCTGAAGGAGATGATGAAAAGACCCTTACATATAGTGTTACCTTAACACTTGTTAATACATACAGGCTTCGCAAGCTAATGGACTATCTTAATGGTCACAGCCTCTCAATTCCCAGGGATATTTTACAAGGGATGGATGTGGTGGTCAAGGAGAATCCATCTAGGCGCACTGTTGCAGTGGGACGACACTTCTATCCCCCTATGACACTGAAAGATCTTCACCGCGGCATAATTGCTGTTGGTGGGTTTCAGCATAGTTTAAAGCCTACATCGCAGGGTCTGTCCCTATGCGTAGACTACTCTGTGTTGGCTTTCCGAAAGCAAGTGTCAGTCTTGGATTTCTTGCATGAGCATATACATAATTTTAAGTTGGAGGAATTTGAATACTTCAGAAAGGATGTTGAAGATGCACTTATTGGATTGAAAGTTAGTGTGACTCATCGTAAATCCAAACAGAAATATACTGTTGTGAGATTAACACCTCAGAATGCAAGGTACGTCACTTTTCCCATTGACAATGCTGAGGGGTGGAATCTCTCAAAGAATGCTAGTCTTCTTAGCTTTTTTAGAGACAAATATGGGAAAGACATTGTATACAAAGATATTCCCTGTTTAGACTTAGGGAAAGGCAACAAGAAGAACTATGTACCTATGGAATTCTGTGTTTTGGTTGGGGGGCAAAAATATCCTAAAGAACGTCTGGATGCAGATTCTGCAAAGACATTGAAAGCACTGTCACTAGCTCACCCAACTGAGAGGGAGAGTGCAATACAAAAGATGGTGCACTCAAATGATGGACCTTGCGGTGGTGGTGTGATAACAAATTTTGGAATGAAAGTGAACACGAACATGACAACCATTCTAGGACGTGTCATTGCCCCCCCAGAATTAAAGCTAGGTGATCCAAATGGCAAGGCTATCAAGATATCGTTGGATCTAGAGAAATGTAATTGGAACCTTCTTGGAAGATCAATGGCAGAAGGCAAACCAGTTGATTGTTGGGCCATTCTTGATTTTACTAGTTCTGGGTCATATAGGCACCAATTGAGAGTCAACGAATTCGTTAAAAAGCTTATTGGTAAATACGAAAGAATGGGTATAAACATGCAGGAGCCCATTTGGTATGAAGAATCTTCAATGCAGATACTTGCAAGGAATGATTTGCTCTCTGAATTACTTCAAAAGATTAGCAATACTTGTAAACAGAATCATGGTCACATGCAATTTCTCCTGTGTGTGATGACTAAGAAAAGTCCAGGTTACAAGTACCTTAAGTGGATTTCTGAGACCAAAGTTGGTATAGTGACACAATGCTGCTTATCTCATAGTGCTAATGAAGGGGATGACCTATTTTATACTAATCTGGCCCTCAAGATCAATGCCAAGCTTGGAGGCAGTAATGTAGAGCTCAACAATATGTTCCCTTACTTTGAGGAAGATAGGCATGTTATGTTTGTTGGGGCTGATGTCAATCATCCTGGTTCTCGGGACACCAAGAGTCCATCAATTGCTGCTGTGGTTGCAACTGTTAATTGGCCTGCAGCAAATCGCTACGCAGCACGTGTTTGCCCTCAGTACAATCGGAGCGAGAAAATACTCAACTTTGGGGAAGTTTGCTTTGAGCTTGTTGCATGTTATAGAAGGATGAATGGAGTCAGGCCTGAAAAAATCATCATTTTTCGTGATGGGGTGAGTGAGTACCAGTTTGATATGGTTCTTAACGAAGAGCTACAGGATTTGAAGAGAGAATTCCAGAGATTAAATTACTTCCCAACTATCACTCTTATTGTAGCACAAAAACGACATCAAACTCGATTCTTTCCAGAGGGTAGGAGGGATGGATCTTCCACTGGCAATGTTCTGCCAGGAACAGTTGTTGATGCAAAAGTTACTCACCCTTTTGAGTTTGACTTTTACCTTTGTAGTTACTATGGAAGCATAGGCACCAGCAAGCCTACTCACTACCACGTTTTATGGGATGAACACAGGTTTAAATCTGATGAATTGCAGAAGCTTATATATGACATGTGCTTCACCTTTGCAAAGTGCACTAAACCTGTATCGTTAGTCCCTCCAGTGTACTATGCTGACCTCGCTGCTTATAGAGGACGATTATACCATGAAGCAAGGGTTGGGATGCAATCTATGAAATCAGTAGGATCCTCATCTTCTAAGGCTTCTTTTGAGCAGGGATTTTATAGGTTGCATCCTGACTTGGAAAACTTGATGTTCTTCATCTAA 3084 0.4374 MESGGDGRGHGGRGLRRQQRQPELNLQPQWRRPLTSPTTSHSNITLQPQWRRSTQPPPAALPSHPQYSATAAEQPRELLLQPEWRRPRPPTTTTTSSPEPEPARRLPRPTSSFWNQNQYSPKPQSSSSGSEGSRTSSAADHADFWRLPSDSQAPKLERLQISRQFATPCSTLERKDKLSPIRRPDNGGTLAILTNKLRVNHFLVKLNPESVIMHYNVGVKPKFPSKHGRPQKLSKSDLSMIRDKLFSDDPERLPLDMTAYDGAKNIFSAIQLPEETFTVELSEGDDEKTLTYSVTLTLVNTYRLRKLMDYLNGHSLSIPRDILQGMDVVVKENPSRRTVAVGRHFYPPMTLKDLHRGIIAVGGFQHSLKPTSQGLSLCVDYSVLAFRKQVSVLDFLHEHIHNFKLEEFEYFRKDVEDALIGLKVSVTHRKSKQKYTVVRLTPQNARYVTFPIDNAEGWNLSKNASLLSFFRDKYGKDIVYKDIPCLDLGKGNKKNYVPMEFCVLVGGQKYPKERLDADSAKTLKALSLAHPTERESAIQKMVHSNDGPCGGGVITNFGMKVNTNMTTILGRVIAPPELKLGDPNGKAIKISLDLEKCNWNLLGRSMAEGKPVDCWAILDFTSSGSYRHQLRVNEFVKKLIGKYERMGINMQEPIWYEESSMQILARNDLLSELLQKISNTCKQNHGHMQFLLCVMTKKSPGYKYLKWISETKVGIVTQCCLSHSANEGDDLFYTNLALKINAKLGGSNVELNNMFPYFEEDRHVMFVGADVNHPGSRDTKSPSIAAVVATVNWPAANRYAARVCPQYNRSEKILNFGEVCFELVACYRRMNGVRPEKIIIFRDGVSEYQFDMVLNEELQDLKREFQRLNYFPTITLIVAQKRHQTRFFPEGRRDGSSTGNVLPGTVVDAKVTHPFEFDFYLCSYYGSIGTSKPTHYHVLWDEHRFKSDELQKLIYDMCFTFAKCTKPVSLVPPVYYADLAAYRGRLYHEARVGMQSMKSVGSSSSKASFEQGFYRLHPDLENLMFFI 1027
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu04g00606 1027 SUPERFAMILY Ribonuclease H-like 676 989 IPR012337 -
Adu04g00606 1027 SMART DUF1785_2 339 389 IPR014811 -
Adu04g00606 1027 Gene3D - 572 753 - -
Adu04g00606 1027 Pfam N-terminal domain of argonaute 196 330 IPR032474 -
Adu04g00606 1027 ProSiteProfiles Piwi domain profile. 690 989 IPR003165 GO:0003676
Adu04g00606 1027 SMART Piwi_a_2 690 988 IPR003165 GO:0003676
Adu04g00606 1027 MobiDBLite consensus disorder prediction 1 139 - -
Adu04g00606 1027 CDD PAZ_argonaute_like 409 505 - -
Adu04g00606 1027 Gene3D - 758 1027 IPR036397 GO:0003676
Adu04g00606 1027 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2C 77 1026 - -
Adu04g00606 1027 Pfam Piwi domain 691 985 IPR003165 GO:0003676
Adu04g00606 1027 Pfam PAZ domain 404 519 IPR003100 GO:0005515
Adu04g00606 1027 Pfam Argonaute linker 1 domain 340 388 IPR014811 -
Adu04g00606 1027 MobiDBLite consensus disorder prediction 20 56 - -
Adu04g00606 1027 SUPERFAMILY PAZ domain 385 545 IPR036085 GO:0005515
Adu04g00606 1027 PANTHER TRANSLATION INITIATION FACTOR 2C, PUTATIVE-RELATED 77 1026 - -
Adu04g00606 1027 CDD Piwi_ago-like 553 987 IPR045246 -
Adu04g00606 1027 ProSiteProfiles PAZ domain profile. 390 506 IPR003100 GO:0005515
Adu04g00606 1027 MobiDBLite consensus disorder prediction 1 17 - -
Adu04g00606 1027 MobiDBLite consensus disorder prediction 109 137 - -
Adu04g00606 1027 Gene3D paz domain 384 510 - -
Adu04g00606 1027 SMART PAZ_2_a_3 390 528 IPR003100 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu04g00606 Adu-Chr4 7566199 7570959 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu04g00606 197 1002 Eukaryotic Initiation Factors Gene Family AT1G48410 35.253 1.76e-144 457
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu04g00606 K11593 - gmx:100783571 1467.21