Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu04g00591 ATGTCCATCAACACCAACAACGACCTTAACGAGAATACGGTTAGGGTGTGTTCTCCTTCTAACAACGATAAATCCTTCTCCCTCACCACGATAGATGATGGATCTCCAAACAGTGATCAGCTGCTTGAGGTTGCGGATGAGCAAAACATTCTTGTGAATGGCTGCGGTCAGTTATTTGAGATTGATGGAAGTGAACATGAGAATGGGAGGGATGAAACAACAGTGATTGATGGTTATGGTGGAGAATCTCAAGGGAAAGGCTATCCTCCGCCGGTTGTAGGTATGGAGTTTGATACTTATGATGATGCTTACAACTATTATAATAGCTATGCCAAGGAGATTGGATTTGCTATTCGGGTTAAGTCGTCATGGACCAGACGTAACAGCAAAGAGAAGCGCGGTGCTGTGTTGTGCTGCAACTGTGAGGGCTTCAAAACACTTAAGGAAGCAAATAGCCACAGGAAAGAAACAAGAACAGGTTGTCTGGCGATGATTAGGTTGCGATCAGTGGAATCTAACAGATGGAGGGTGGATGAAGTCAAGCTTGAGCACAACCATTCATTTGATCCTGAGAGAGCACAAAACTCGAAATCACATAAGAGGACAGACGGTGGGTCGAAAAGAAAACTTGAGCCAACTCTAGATGTTGAAGTACGAACAATCAAGCTATATCGAATGCCTGTTGGGGATGCATCAGGTTATGGAAGTCCAAATTCTAATGAAGGAGGAACTAGCACCAACCTTAATTTTTCTAGGCATTTGAAACTTAGGAAAGGTGATACAGAACTTGTTTCAAACTACTTCTGCAAATGTCAACTTATAAATCCCAATTTCTTCTATGTTATGGACTTGAATGATGATGGACAACTGCGGAACATTTTTTGGATTGATTCTAGATCTAGAGCTGCATATAGTTATTTTGGTGATGTGGTTGCATTTGACTCTACATGTTTGTCAAACAATTATGAGATTCCACTTGTTTCATTTGTCGGTGTTAATCACCATGGGCAGTCTATTTTACTTGGATGTGGTCTGCTTGCAGATGAGACATTTGAAACATATAATTGGTTTTTTAGGGCGTGGCTTACATGTATGTCCGGCCGTCCTCCTCAAACTGTTGTTACAAACCAGTGCAACAAGGCCATGCAAAGTGCAATAGCGGAGGTTTTCCCGAGAGCTCACCACAGAATTTGTCTATCACAAGTCATGCAGAGTATTCTCGGATGTTTGGTACAGTTTCAGGAATACGAGGCAATTCAGATGGCATTGTCTAGAGTGATATATGAAACTAAGACAATCGATGATTTTGAAAGGGCTTGGGATGAACTTACCCAGCATTTTGGAATAAGAAATCATGAAAAGCTTCAATCCTTGTATGGTGAACGTGAGCACTGGGCTCCTGCTTACACCAAGGACACGTTTTTTGCTGGAATTTCTGATCAAGAAAAAGGTGAGTCCGTGGTACCTTTTTTTAAGGGTCATGTGCATCAGCAAACTTCCTTGAAAGAATTTTTTGAGATTTATGAATTAGTTATGGAGCAAAAGAGAAAAACTGAAGCTATTGATGATTTCAAGTCGCGAGATTCTAGTCCTTCACTGAGAACAAGGTACTACTATGAGTTGCAACTGTCCAAATTGTACACAAATGCAATGTTCAGGAAGGTCCAGGAGGAGATTGTGATGATGTCCTCTTGTTTCGGCATCACAGAAAGTCAAACAAATGGATCTACAGCGACATACATGGTTAAAGAGCGCCAAGGCGAGGAACTTGTCCAAGATGCAGGGCATGTTGAAGTCACATATGATAAAACCGGAGCAGAAGTGCGCTGCAGTTGTTGTTGCTTTAACTTCAAAGGCTATTTGTGCAGACATGCCTTGTCTATCCTCGATTATAATGGCGTGGAGGAAATTCCTTGTCAATATGTTTTGCCGAGATGGAGGAAGGACTTTAAACGATTGTATGTACCTCACCTTAGCTCTGATAATGTTGATATCACCAACCCAGTTCAGTGTTTTGATCATTTGTACAAACGGGCGATGCAAGTTGTTGAAGAAGGGATGATATCCCAAGCTCATTATATGGTTTCTTGGCAGGCTTTTAAAGAGTCTTTGAATAAGATTCGCCTTGTATCAGATAAAATTGAGTAA 2148 0.4129 MSINTNNDLNENTVRVCSPSNNDKSFSLTTIDDGSPNSDQLLEVADEQNILVNGCGQLFEIDGSEHENGRDETTVIDGYGGESQGKGYPPPVVGMEFDTYDDAYNYYNSYAKEIGFAIRVKSSWTRRNSKEKRGAVLCCNCEGFKTLKEANSHRKETRTGCLAMIRLRSVESNRWRVDEVKLEHNHSFDPERAQNSKSHKRTDGGSKRKLEPTLDVEVRTIKLYRMPVGDASGYGSPNSNEGGTSTNLNFSRHLKLRKGDTELVSNYFCKCQLINPNFFYVMDLNDDGQLRNIFWIDSRSRAAYSYFGDVVAFDSTCLSNNYEIPLVSFVGVNHHGQSILLGCGLLADETFETYNWFFRAWLTCMSGRPPQTVVTNQCNKAMQSAIAEVFPRAHHRICLSQVMQSILGCLVQFQEYEAIQMALSRVIYETKTIDDFERAWDELTQHFGIRNHEKLQSLYGEREHWAPAYTKDTFFAGISDQEKGESVVPFFKGHVHQQTSLKEFFEIYELVMEQKRKTEAIDDFKSRDSSPSLRTRYYYELQLSKLYTNAMFRKVQEEIVMMSSCFGITESQTNGSTATYMVKERQGEELVQDAGHVEVTYDKTGAEVRCSCCCFNFKGYLCRHALSILDYNGVEEIPCQYVLPRWRKDFKRLYVPHLSSDNVDITNPVQCFDHLYKRAMQVVEEGMISQAHYMVSWQAFKESLNKIRLVSDKIE 715
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu04g00591 715 MobiDBLite consensus disorder prediction 186 211 - -
Adu04g00591 715 Pfam FAR1 DNA-binding domain 105 189 IPR004330 -
Adu04g00591 715 ProSiteProfiles Zinc finger SWIM-type profile. 595 633 IPR007527 GO:0008270
Adu04g00591 715 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 41 712 IPR031052 GO:0006355
Adu04g00591 715 Pfam SWIM zinc finger 607 630 IPR007527 GO:0008270
Adu04g00591 715 Pfam MULE transposase domain 310 404 IPR018289 -
Adu04g00591 715 PANTHER PROTEIN FAR1-RELATED SEQUENCE 8 41 712 - -
Adu04g00591 715 SMART 26again6 608 635 IPR006564 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu04g00591 Adu-Chr4 7340338 7343130 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Adu04g00591 MULE 1.5e-25 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu04g00591 K17604 - gmx:100796448 1197.19