Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu04g00590 ATGATGGCAGAAGTCGGTGACCACAATAGCAACACCACCACATGTGCTGCAGTTCTCAACTCCATGGAAGAGACCGCCTTTTGCTGTGAACAATTGCCAGAGGGTGAATGCATTGAGGCTCAGAAAGAAGAAGACGGTTCACTAGTTGAGTTGGATTGTCGAAATGGCTTTTCTGAAGGAAGAAAGGAGTTCGTCACACCTGCTGTCGGAATGGAGTTTGAGTCTTATGATGATGCTTACAATTATTACATCTGCTATGCCAAGGAAGTCGGATTTCGTGTAAGGGTGAAGAATTCATGGTTCAAGCGAAACAGCAGAGAAAAATATGGTGCGGTGCTTTGCTGTAGCAGTCAGGGTTTCAAAAGAATAAAGGATGTTAACCACATGAGGAAAGAAACAAGAACTGGTTGTCCTGCAATGATAAGGATGAGGTTAATGGACTCTCAGAGGTGGAGGATACTCGAGGTCACACTTGAACATAACCACATGTTAGGTTCTAAGATACACAAATCAGTTAAGAAGATGGGAACTGGAACCAAAAAGAAGTCATTGCCGAGTTCAAATGCTGAAGTGCACACGGTGAAGTTATACCGTGCACTTGTGATAGATGCAGGAGGTAATTCTAGTGCAATCTCAAATGCTAGAGAAGACAGAACTTTGTCGGAATTTTGTAATAGGTTGAACCTTAAAAGGGGTGACACACAAGCCATTTATAATTACCTGTGTCGTATGCAATTGACTaatcctaacttcttttacttgatggatttcaatgatgaagggcatttgaggaatgcattttgggcggattctaggtccagggctgcatgtggttattttggtgatgttatttactttgacaacacttaTTTGTCAAGCAAATATGAAATCCCTCTCGTGGCTTTTGTTGGAATAAATCATCACGGGCAATCAGTATTACTTGGTTGTGGTCTACTTGCAGGTGAAACAATAGAATCTTATGTATGGTTGTTCAGAGCATGGATTACATCTCTGTCTGGTTGTTCTCCCCAAACTATTATCACCGATAAGTGCAAGGTTTTGCAAAGTGCCATTGCAGAAGTTTTTCCCCAATCTCTCCACCGTTTTGGTTTGCCATTAATCATGAAAAAAGTACCAGAAAAATTGGGAGGGTTGCGCAACTATGATATGATTAGGAAAGAACTGATTAAAGCAATTTATGAGACATTGAAAATGAATGAATTCGAATCAGCATGGGCATTCATGGTTCAACGTTTTGGAGTTGGTGATCATGAATGGCTTTGTTCTCTATATGAAGATCGGAATTGTTGGGCACCGGTATATGTGAAGGATACATTTTTTGCCGGAATGTCTGCAACACGACCTGGTGAAAGCTTTACTCCATTTTTTGATAGATTTGTGCACAAGCAGACTCCTTTAAAGGAGTTTCTTGATAAGTATGAACTAGCTCTCCACAAGAAGCACAAGGAAGAGGCTCTTGCAGACATAGAATCAAGAAGCTCAACCCCCTTGCTGAAAACTAGATGTTCTTTTGAATTGCAGCTCTCTAGAATGTACACTAGGCAAATGTTCTTGAAGTTCCAATTTGAGGTGGAAGAAATGTACTCTTGTTTCGGAACAACACAGTTACACGTGGATGGTCCGGTCATAATTTTCTTGGTCAAGGAGCGTGTCTTGTGCGAAGGAAATCGGCGCGAGATTAGGGACTTTGAAGTTCTGTACAGTAGGACAGCAGGCGAAGTTCGCTGCATCTGTAGTTGCTTTAATTTTTATGGATATTTATGCCGGCACGCATTGTGTGTGCTAAATTTCAATGGCGTGGAGGAGATACCTTCCAGATACATTCTTTCAAGGTGGAAGAAAGATTACAAGCGCCTTCATATTCCTGATCATAACACTGGTGTTCCTGATGATATTGACCATTCTCAATGGTCTAATCAGTTATTTAGAAGTGCCTTGCAAGTTGTTGAGGAAGGGACAGTTTCTGTGGACCATTACAATGTAGCTTTGCATGCTATTGAAGAATCACTAAATAAGGTTCATGATGTAGAATATAGGCAGATATAA 2067 0.3856 MMAEVGDHNSNTTTCAAVLNSMEETAFCCEQLPEGECIEAQKEEDGSLVELDCRNGFSEGRKEFVTPAVGMEFESYDDAYNYYICYAKEVGFRVRVKNSWFKRNSREKYGAVLCCSSQGFKRIKDVNHMRKETRTGCPAMIRMRLMDSQRWRILEVTLEHNHMLGSKIHKSVKKMGTGTKKKSLPSSNAEVHTVKLYRALVIDAGGNSSAISNAREDRTLSEFCNRLNLKRGDTQAIYNYLCRMQLTNPNFFYLMDFNDEGHLRNAFWADSRSRAACGYFGDVIYFDNTYLSSKYEIPLVAFVGINHHGQSVLLGCGLLAGETIESYVWLFRAWITSLSGCSPQTIITDKCKVLQSAIAEVFPQSLHRFGLPLIMKKVPEKLGGLRNYDMIRKELIKAIYETLKMNEFESAWAFMVQRFGVGDHEWLCSLYEDRNCWAPVYVKDTFFAGMSATRPGESFTPFFDRFVHKQTPLKEFLDKYELALHKKHKEEALADIESRSSTPLLKTRCSFELQLSRMYTRQMFLKFQFEVEEMYSCFGTTQLHVDGPVIIFLVKERVLCEGNRREIRDFEVLYSRTAGEVRCICSCFNFYGYLCRHALCVLNFNGVEEIPSRYILSRWKKDYKRLHIPDHNTGVPDDIDHSQWSNQLFRSALQVVEEGTVSVDHYNVALHAIEESLNKVHDVEYRQI 688
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu04g00590 688 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 40 684 IPR031052 GO:0006355
Adu04g00590 688 PANTHER PROTEIN FAR1-RELATED SEQUENCE 6 40 684 - -
Adu04g00590 688 Pfam SWIM zinc finger 578 602 IPR007527 GO:0008270
Adu04g00590 688 Pfam FAR1 DNA-binding domain 81 164 IPR004330 -
Adu04g00590 688 ProSiteProfiles Zinc finger SWIM-type profile. 570 606 IPR007527 GO:0008270
Adu04g00590 688 Pfam MULE transposase domain 283 376 IPR018289 -
Adu04g00590 688 SMART 26again6 581 608 IPR006564 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu04g00590 Adu-Chr4 7336590 7339750 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Adu04g00590 MULE 2.6e-25 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu04g00590 K17604 - gmx:100796448 1160.21