Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu04g00587 ATGTCGTCTCACCAAACCACCACTGACTCCGAGCTCGTCTGCGTCACCGGTGCTAACGGCTTCATCGGTTCCTGGCTAGTCCACACCCTCCTCCACCACCACCCACGCTACACCGTCAACGCCACCGTCTTCCCCGGTTCCGATTACTCCCACCTCCTCACCCTCCACCCTGACGCCAATTCCCGCATCAAAATCTTCCCCGCCGACATCCTCGACGCCGCTGCCATATCCGCCGCAATCTCCGGCTGCTCCGGCGTCTTCCACGTCGCCTCCCCCTGCACTCTCGACGACCCCGCAGACCCGGAGAATTCCCTCCTCAGGCCTGCCGTCCAAGGAACCCTAAACGTCCTCGAGGCCGCGAAGCGAACAAACGCGCGGCGCGTTGTCCTCACGTCCTCAATATCCGCTATGGTTCCGAACCCTAATTGGCCTCCAAACAAACCTTTCGACGAGGATTCCTGGACGGACGTTGAATTCTGCAAGAAGAGGGGGAAGTGGTACCCAGTGTCGAAGACAGCGGCGGAGAAGGCGGCGTGGGAGTTCATGGAAAAGAACGGCGGCGCTGACGTGGTGGCAGTGCTTCCGTCGACGTGTCTTGGGGAACTGCTGCAGAAGGAGCTGAATGCAAGCTCGGCGGTCCTGCAGAGGCTGATGACGGGGTCGAGGGACACGCAGGAGCATTACTGGTTGGGTGCAGTGCACGTGAGGGACGTTGCTAGGGCTCAGGTTTTGATCTATGAGACTCCTTCTGCTGCTGCTAGATACTTGTGTACCAATGGTATCTACCAGTTCTCTAGCTTTGCAAAGATTCTCTCTGAGTTGTACCCTGATTTTCCTATCTACAGGTTCCCTGAAGAAACTCAACCTGGCTTGACACCATATAAAGATGCAGCAAAGAGACTAATAGATTTGGGTTTTGTGTTCACCCCAGTTGAAGATGCTGTGCGAGAAGCAGTGGAGAGCCTCATAGCTAAAGTAATAGTCACAAACCTTGTCACCATATACATTGTTACTGGCCCATTTAGCTCTTTGTATCATCCTCCTCCTCATCATAATAATAACTTTAACTCAATCTTGCAAGAACTCAACACCACAAAATCTCAACTTGCTGCTAGCCATTCACTTTTGTCTGAGCTTCACCATAGGCTCAACTCAACTAACCTTCTTGTCCAAGCATTGCTCATTGATCTTACAACACGCCAACAAGAAAAGCAATATTCTAGAAACAACAATGGCGAAAGGTCTTCGAATGAAGAGCTTAATCTTGCACTTGCCTCTTACAAGCTCCCTTTCGGATACTCGCAATGGATAGGATCAGATGAGATTCATTCTCCGATTGGCGCATTGTGTTTGAGGTTCCAAGATGAGTTGAACCAATACATGTCATATGACATAGGAGGGGAATGCCTTGCAGATAAGGTGTTTGCACAAATGCTTGTGTCAAAAGGGTGTGAGCCACTCCCTAAAAGAAGGTGCCATCCCAAGTCTCCAAAAGGTTTTGTTGAGCCAAATCAAGGAAGGGAAAATGGTAGGTGGATCTTTGATGATGGTGGACTTGATTTTGGGATAGACCGAGTTCTTGGGACGAAAAAATCCGGCAGCACGATCAGTATCGGACTTGACATTGGTGGTGGAACAGGGACATTTACTGCAAGGATGAAAGAAAGGAATGTGACAATCCTCACAAGCACACCGGATTTGGACGGTCCATTCAGCCGCTTCATTGCATCAAGGGGATTGATTCCAATTCATCTCAGCATATCTCAGAGGCTTCCATTCTTTGAGAACACACTTGATATTGTTCATTTCATGGAATTCATAGGGAATTGGTTGCCAGAGACTATGCTTGAGTTTTTGCTATATGATGTGTACAGGGTGTTGAGGCCTGGAGAAATTTTCTGA 1902 0.4968 MSSHQTTTDSELVCVTGANGFIGSWLVHTLLHHHPRYTVNATVFPGSDYSHLLTLHPDANSRIKIFPADILDAAAISAAISGCSGVFHVASPCTLDDPADPENSLLRPAVQGTLNVLEAAKRTNARRVVLTSSISAMVPNPNWPPNKPFDEDSWTDVEFCKKRGKWYPVSKTAAEKAAWEFMEKNGGADVVAVLPSTCLGELLQKELNASSAVLQRLMTGSRDTQEHYWLGAVHVRDVARAQVLIYETPSAAARYLCTNGIYQFSSFAKILSELYPDFPIYRFPEETQPGLTPYKDAAKRLIDLGFVFTPVEDAVREAVESLIAKVIVTNLVTIYIVTGPFSSLYHPPPHHNNNFNSILQELNTTKSQLAASHSLLSELHHRLNSTNLLVQALLIDLTTRQQEKQYSRNNNGERSSNEELNLALASYKLPFGYSQWIGSDEIHSPIGALCLRFQDELNQYMSYDIGGECLADKVFAQMLVSKGCEPLPKRRCHPKSPKGFVEPNQGRENGRWIFDDGGLDFGIDRVLGTKKSGSTISIGLDIGGGTGTFTARMKERNVTILTSTPDLDGPFSRFIASRGLIPIHLSISQRLPFFENTLDIVHFMEFIGNWLPETMLEFLLYDVYRVLRPGEIF 633
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu04g00587 633 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 533 630 IPR029063 -
Adu04g00587 633 Pfam NAD dependent epimerase/dehydratase family 13 251 IPR001509 -
Adu04g00587 633 Gene3D - 2 335 - -
Adu04g00587 633 Gene3D Vaccinia Virus protein VP39 519 633 IPR029063 -
Adu04g00587 633 PANTHER S-ADENOSYL-L-METHIONINE-DEPENDENT METHYLTRANSFERASE SUPERFAMILY PROTEIN-RELATED 506 633 - -
Adu04g00587 633 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 8 322 IPR036291 -
Adu04g00587 633 CDD FR_SDR_e 13 306 - -
Adu04g00587 633 PANTHER S-ADENOSYL-L-METHIONINE-DEPENDENT METHYLTRANSFERASE SUPERFAMILY PROTEIN 506 633 - -
Adu04g00587 633 PANTHER S-ADENOSYL-L-METHIONINE-DEPENDENT METHYLTRANSFERASE SUPERFAMILY PROTEIN-RELATED 321 504 - -
Adu04g00587 633 PANTHER S-ADENOSYL-L-METHIONINE-DEPENDENT METHYLTRANSFERASE SUPERFAMILY PROTEIN 321 504 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu04g00587 Adu-Chr4 7295941 7300245 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu04g00587 11 322 Monolignol Biosynthesis Gene Families AT2G02400 65.176 2.41e-148 430
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu04g00587 - - aip:107638781 538.88
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu04g00587 04 7295941 7300245 Adu04g00587 04 7295941 7300245 ECH