Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu04g00566 ATGTATCCGAGGCTGATACACCCACATGAAGCAGGGCTTGTTGGACAAGAAGATGTTCAAGTTGGTGGCGCCTCCAATCTCACACACAAGGGAGACCCATGTCTTGTTCTCACTGCTGATCCAAAACCAAGACTTCGTTGGACTCAGGACCTCCATGAACGCTTTGTTGATGCTGTCACTCAACTCGGAGGTGCTAGTAAAGCTACGCCAAAAGCAATCATGCGGACCATGAATGTCAAGGGTTTGACTCTATTTCATTTGAAGAGTCATCTTCAGAAATATAGACTTGGTAAGCAATCAGGGAAAGATATGGGTGAGGGATGCAAAGATGGATTGTCGGGTTCATACTTAGAAAGTCCTGGTACTGACAACTCTTCTCCAAAGTTGCCAACTTCCGATACCAATGAGGGTTTTGAAATCAAGGAAGCCTTAAGAGCACAAATGGAAGTGCAAAGTAAACTACATTTGCAAGTAGAGGCAGAGAAGCATTTGCAAATTCGCCAAGACGCAGAGCAAAGATACATGGTCATGCTTGAAAGAGCTTGTAAGATGCTAGCTGATCAATTCATTGGCGCTACCGTCATAGACACCGACAACCAAAAGTTTCAAGGAGTCGGGAGCAAGACCCCAAGAGGTCCCATGGTTGATCCTCTTGGTTTTTTTTCCATGCCATCTACTGAAGTGGCGGGAGTCAATGTCTCCCGCCACAGAGGGCTGACTGTTCGACTGAAAGTTGTCTAA 741 0.4588 MYPRLIHPHEAGLVGQEDVQVGGASNLTHKGDPCLVLTADPKPRLRWTQDLHERFVDAVTQLGGASKATPKAIMRTMNVKGLTLFHLKSHLQKYRLGKQSGKDMGEGCKDGLSGSYLESPGTDNSSPKLPTSDTNEGFEIKEALRAQMEVQSKLHLQVEAEKHLQIRQDAEQRYMVMLERACKMLADQFIGATVIDTDNQKFQGVGSKTPRGPMVDPLGFFSMPSTEVAGVNVSRHRGLTVRLKVV 246
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu04g00566 246 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 2 235 IPR044848 GO:0003700
Adu04g00566 246 MobiDBLite consensus disorder prediction 99 133 - -
Adu04g00566 246 PANTHER MYB-LIKE TRANSCRIPTION FACTOR FAMILY PROTEIN 2 235 - -
Adu04g00566 246 Gene3D - 41 99 - -
Adu04g00566 246 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 42 97 IPR006447 GO:0003677
Adu04g00566 246 Pfam Myb-like DNA-binding domain 45 95 IPR001005 -
Adu04g00566 246 Pfam MYB-CC type transfactor, LHEQLE motif 139 184 IPR025756 -
Adu04g00566 246 SUPERFAMILY Homeodomain-like 42 98 IPR009057 -
Adu04g00566 246 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 39 99 IPR017930 -
Adu04g00566 246 MobiDBLite consensus disorder prediction 117 133 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu04g00566 Adu-Chr4 7065404 7068493 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu04g00566 31 245 G2-like Transcription Factor Family AT3G24120 46.903 1.41e-61 194
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Adu04g00566 Myb_DNA-binding 3.6e-06 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu04g00566 - - gmx:100786397 408.683