Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu04g00557 ATGGGTGAACAATTAGGGCAACTCAAAATCATAGTGGTGCAAGGGAAGAGGTTGGTGATCCGGGATTTCAAGAGCAGTGATCCTTATGTTGTCCTCAAACTAGGCAATCAGACAGCAAAGACCAAAGTCATTAACAGCTGCTTGAATCCTGTTTGGAATGAAGAGCTGAATTTCACCCTCACTGAACCTTTGGGAGTTCTGAATTTGGAAGTGTTTGATAAAGATCTTTTGAAATCTGATGACAAGATGGGAAATGCATTCCTCAACCTTCAACCATTGGTCTCTGCAGCTAGACTAAGAGATATCTTAGGAGTCTCATCAGGTGAAACAACATTAAGGAAGGTCATACCTGACAACGAAAACTGCCTCGTCCGCGAAAGCAGTATCAATTGCGTAAATGGCGAGGTTGCGCAGAATGTTTGGTTAAGGCTGCGCGGGGTGGAGTCCGGCGAGGTAGAATTGACCATCAAGTTGGTCAAAAATGTTACCACCAAAACATAG 501 0.4391 MGEQLGQLKIIVVQGKRLVIRDFKSSDPYVVLKLGNQTAKTKVINSCLNPVWNEELNFTLTEPLGVLNLEVFDKDLLKSDDKMGNAFLNLQPLVSAARLRDILGVSSGETTLRKVIPDNENCLVRESSINCVNGEVAQNVWLRLRGVESGEVELTIKLVKNVTTKT 166
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu04g00557 166 Pfam C2 domain 6 98 IPR000008 -
Adu04g00557 166 PANTHER PROTEIN C2-DOMAIN ABA-RELATED 4 1 164 IPR044562 -
Adu04g00557 166 PANTHER PROTEIN C2-DOMAIN ABA-RELATED 11 1 164 - -
Adu04g00557 166 SMART C2_3c 7 102 IPR000008 -
Adu04g00557 166 PRINTS C2 domain signature 22 34 IPR000008 -
Adu04g00557 166 PRINTS C2 domain signature 46 59 IPR000008 -
Adu04g00557 166 PRINTS C2 domain signature 67 75 IPR000008 -
Adu04g00557 166 Gene3D C2 domain 4 165 IPR035892 -
Adu04g00557 166 CDD C2_ArfGAP 5 150 - -
Adu04g00557 166 ProSiteProfiles C2 domain profile. 1 103 IPR000008 -
Adu04g00557 166 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 4 159 IPR035892 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu04g00557 Adu-Chr4 6846092 6848732 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu04g00557 1 157 C2H2 Transcription Factor Family AT4G05330 43.396 1.38e-36 127