Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu04g00546 ATGTCCTCTGCAACATTATTAACCGAGTCCTTGCATAGTATGCACCAATCATCAGATGAAGGTGCTAAATCCACCATGGGAAGTTCCCAAATGTTCAACAATTACTATGGAATCATCACTAGTAGTAGTAGTGAGATAGTAGAGATAGAAGAAGAAGAAGAACAAGACATGAAGACATCAAAATTGTACCTTAATAATGATGCTCCTAGGACTATGTCAAGAATTAGTGAAGGGAAGAGTAGTGAGGAAGAAGAAAGTGTTTATGTAGCAGTTGGTAAGAGTGAGACAAGCATGGAAGCTCTAACATGGACTCTCAAGAACTTGGCTACTACCTCATCTACCATGCTTTATCTCATCCATGTTTTTCCTGAGATCAAACACATTCCAAATCCATCTGTTGTTTCTGCAATGACAGTGGGAATGGGAATGATCCCAAAGAGCCAAGTGAGTGGTGAGCAAGTAGAGACCTACATGGCCCAAGAAAGAGCCAAGAGAAGACACCTCCTTCATAAGTTCCTCCAAACTTGTTCTGCTTGCAAGGTTAAGGTGGACACCATTCTCATTGAGAGTGATTTTGTTGCAAAGGCTATATTGGACTTGATCCCCATTCTTCATATTACAAAACTAGTTCTTGGACTCAACAAATCCCAATTAAGAAAACTAAGATCAAGAAAAGGGAATGGCATAGCAGATCAAGTACTTCAGAGTGCACCAGAAATGTGCAAGGTGAGAATTGTGTGTGAAGGGAAGGAAATTAGTGAAAACATAACTGGATCAGGGTTAGGTTCAGGGTCACCCTCTCCTTCTCCTCATGCCACTTCCATGCCCCATAAAGAGCCTCTCAAAAAAGATTCTGTTTCATGCACTTGTTTTAACTTTTAA 882 0.4048 MSSATLLTESLHSMHQSSDEGAKSTMGSSQMFNNYYGIITSSSSEIVEIEEEEEQDMKTSKLYLNNDAPRTMSRISEGKSSEEEESVYVAVGKSETSMEALTWTLKNLATTSSTMLYLIHVFPEIKHIPNPSVVSAMTVGMGMIPKSQVSGEQVETYMAQERAKRRHLLHKFLQTCSACKVKVDTILIESDFVAKAILDLIPILHITKLVLGLNKSQLRKLRSRKGNGIADQVLQSAPEMCKVRIVCEGKEISENITGSGLGSGSPSPSPHATSMPHKEPLKKDSVSCTCFNF 293
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu04g00546 293 PANTHER U-BOX DOMAIN-CONTAINING PROTEIN 52-LIKE 39 292 - -
Adu04g00546 293 PANTHER ADENINE NUCLEOTIDE ALPHA HYDROLASES-LIKE SUPERFAMILY PROTEIN 39 292 - -
Adu04g00546 293 MobiDBLite consensus disorder prediction 1 26 - -
Adu04g00546 293 MobiDBLite consensus disorder prediction 256 272 - -
Adu04g00546 293 CDD STK_N 87 249 - -
Adu04g00546 293 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 86 244 - -
Adu04g00546 293 MobiDBLite consensus disorder prediction 256 284 - -
Adu04g00546 293 Gene3D HUPs 73 255 IPR014729 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu04g00546 Adu-Chr4 6723925 6726627 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu04g00546 77 253 U-box Gene Family AT5G65500 30.435 1.25e-13 69.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu04g00546 - - lang:109333758 276.174