Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu04g00527 ATGCAGGGCAAAGAATCTCAAGGTTCCAATGAGAACCTTGAGGCTAAACAGAAAACACCCATGTTCAATAACTTGGGTGGGATGAAAGATCTTTTGAAGAAACTGATAGCTCAACTGATTGTTCCATGGTATCATCCTGCGATTTTAAGAAAGCTAAATGTTACTCCTCGTACTAGAATCTTGCTGCATGGGCCAAGCGGTTGTGGCAAGACCACACTGGCTCACGCGATAGCTAATGAGACTCGTGTTCCCTTCTATCAGATATTACCAGGACATTTTGGAATGGTTGTGCCTGTTCTTGTAAGATTAACCCCAAGAACTTTGGCCCTTCTATTCAAATGGAGTTTCAAATCGTTTTTTATGTTCTTAGGACATTTTGGAATGGTTGCCCCTGTTCTTGTGATTCTGAAGAAAGCATCAGAGCTATTTTTGCCGAAGATTGGAAAGCGTGGATCATCTAATGGCGGAGCTACAAATAGTCAAGATTCTCTTGACCTGGCCTTGAGAGGATTGTTTCAGCGAGAGCTTCTTCTTGTCATTATTGAAGCGTCAAGACGAGATATCCTTAAGTTACTGATCTGCAAACCTAAGGGTTCATTCGATCTTGATGAAATAGTAAGTAAAACTATTATTGCCAAAGCTGTTGCCAATGAAGCGGGAGCTAATTTCATTCGTATTAAGGTTTGTCTAAATACTTCATCTTACCTTATTCATTTTTGGTTTTGCTTCAATGGGAATATTGACAAATGTGGATCAGGCATTGAACGAGTAGTGAATCAGTTACTAATTGAGCTAGACGGTGCGGGACAACGCAAAATGTTTTTGTCATTGGTGCAACAAATAGGCCTGATAGGATGGATGAGGCTCTCCTCCGTCCTGGTAGACTTGGTGGATGAAGCAACTTGTGCTGCTATTGATGAGAAATTGACCTCAGTTGAAGCCTCTAGTGATACTAATACTTGCAAGCCAAGACATTCTGATATAGCACTTAGTCAGGTCTTTCCCTCAGTGTCTTCGGCGAAAAGGCGGAAGTATGAGCATGAGCGCTCGGCAAAGCGATTTAAAGCATCATGA 1074 0.4171 MQGKESQGSNENLEAKQKTPMFNNLGGMKDLLKKLIAQLIVPWYHPAILRKLNVTPRTRILLHGPSGCGKTTLAHAIANETRVPFYQILPGHFGMVVPVLVRLTPRTLALLFKWSFKSFFMFLGHFGMVAPVLVILKKASELFLPKIGKRGSSNGGATNSQDSLDLALRGLFQRELLLVIIEASRRDILKLLICKPKGSFDLDEIVSKTIIAKAVANEAGANFIRIKVCLNTSSYLIHFWFCFNGNIDKCGSGIERVVNQLLIELDGAGQRKMFLSLVQQIGLIGWMRLSSVLVDLVDEATCAAIDEKLTSVEASSDTNTCKPRHSDIALSQVFPSVSSAKRRKYEHERSAKRFKAS 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu04g00527 357 PANTHER NUCLEAR VALOSIN-CONTAINING PROTEIN-LIKE 9 88 - -
Adu04g00527 357 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 20 190 IPR027417 -
Adu04g00527 357 CDD AAA 60 89 - -
Adu04g00527 357 Gene3D - 2 113 IPR027417 -
Adu04g00527 357 PANTHER AAA-FAMILY ATPASE 9 88 - -
Adu04g00527 357 Pfam ATPase family associated with various cellular activities (AAA) 60 175 IPR003959 GO:0005524|GO:0016887
Adu04g00527 357 SMART AAA_5 56 182 IPR003593 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu04g00527 Adu-Chr4 6480410 6483652 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu04g00527 22 201 Calmodulin-binding Proteins AT3G56690 24.731 1.25e-08 54.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu04g00527 K14571 - dcr:108202651 115.546