Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu04g00525 ATGTCGACACCTTCCCGGCACCGTAACGGCCAGCTTCCAGAACCTCCCGATACCGGTGGTTCCCCTTCGGTTGAAGAAGATCGGCTTGGTGCCGGGTCGGGTCACGATGACGGGCGCACTCAGGAATCCGGCTCATCTTTGGATGATGATGATGGTAATGACATTGAAAATTCATCTGGGAGTGGCAAACATTCAGGCATGCCAAAGCGAAAGAGGAAGATGGAGAGAAGACTCGAAGATTTCGTGGAGAATATGGTAAAGAAGGTGATGGAAAAGCAAGAGCAGATGCATAAACAGTTAGTGGACATGATTGAAAAGAAGGAGAAGGAGAGAGTGATGAGAGAAGAAGCTTGGAAGCAGCAAGAGATTGAGAGAATAAGGAAGGACGAAGAGGCCAGAACCCAAGAGAGGTCACGAAACTTGGCCCTCATATCTGTCATCCAAAATCTGCTTGGCCATGAGATTCAAATCCCGCAACAGGCAGAGGTAAGCAGCAAAGGAGAAGAGGACGAACCCAGACACGAAGGCGAGGAAGCGAATGCTCAAAAGAGTCTCGGCATCAGCGGTGAGGGAAGTAACAACAGGTGGCCTGATGTTGAGGTTCAAGCGCTGATAACCTTGAGAACTTCAATGGAGCAGAAATTTCATCTTATGGGATCCAAGGTATCAATATGGGAGGAGATATCTGAAGCAATGAATAAAATGGGATACCACCGTTCTGCAAAGAAGTGCAAGGAAAAATGGGAGAACATCAACAAGTACTATAAAAGGACGATAGGGAGCGGCAAGAAGCGGCGTCAAAATAGTAAATCCTGCCCTTACTTTAATGAGTTGGATGTTCTATATAGCAATGGTCTCCTCAATCTTGGAAATCCCTTGAGCAGTAGTACCAATGATGTGTCCAAGATTGAAAAGGAGGAAAGTGAAACTTGA 933 0.4662 MSTPSRHRNGQLPEPPDTGGSPSVEEDRLGAGSGHDDGRTQESGSSLDDDDGNDIENSSGSGKHSGMPKRKRKMERRLEDFVENMVKKVMEKQEQMHKQLVDMIEKKEKERVMREEAWKQQEIERIRKDEEARTQERSRNLALISVIQNLLGHEIQIPQQAEVSSKGEEDEPRHEGEEANAQKSLGISGEGSNNRWPDVEVQALITLRTSMEQKFHLMGSKVSIWEEISEAMNKMGYHRSAKKCKEKWENINKYYKRTIGSGKKRRQNSKSCPYFNELDVLYSNGLLNLGNPLSSSTNDVSKIEKEESET 310
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu04g00525 310 Gene3D - 196 257 - -
Adu04g00525 310 MobiDBLite consensus disorder prediction 1 78 - -
Adu04g00525 310 PANTHER HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN 32 308 - -
Adu04g00525 310 MobiDBLite consensus disorder prediction 164 180 - -
Adu04g00525 310 Pfam Myb/SANT-like DNA-binding domain 194 280 IPR044822 -
Adu04g00525 310 CDD GT1 194 258 - -
Adu04g00525 310 SMART sant 192 254 IPR001005 -
Adu04g00525 310 Coils Coil 90 110 - -
Adu04g00525 310 ProSiteProfiles Myb-like domain profile. 188 252 IPR001005 -
Adu04g00525 310 MobiDBLite consensus disorder prediction 160 194 - -
Adu04g00525 310 PANTHER - 32 308 - -
Adu04g00525 310 MobiDBLite consensus disorder prediction 29 46 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu04g00525 Adu-Chr4 6422476 6424090 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu04g00525 69 282 Trihelix Transcription Factor Family AT5G47660 46.396 1.30e-55 183
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Adu04g00525 Myb_DNA-bind_4 1.4e-21 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu04g00525 - - aip:107638726 565.844