Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu04g00513 ATGACTTCCATACCTTCAAAAAACTTATGGATTAGGAGGCAACAATGCCCTTGTGGAGATTGGAAGTGTTACATTACATATGAGGGTGATTCTGATGAAGGTTCTAGAGCAGAAGAATTGGTAAAGGCAGAAAAAGCTTCATCCGGTGCCATGATCACCCCATATGTTGGAATGGTATTTAAGAGTGATGATGAAGCTTTTGAGTATTATGGCAATTTTGCTAGAAAGAATGGGTTTTCTGTTAGGAAGGAAAGGTCTAGGGTTAGCCCCCAGTTGGGGATTTACAAGCGTGACTTTGTTTGTTACCGTTCTGGATTCGCCCCGGTGAAGAGGAAGGCCAATGGAGAACAGCATAGAGATAGGAAATCGGTTAGGTGTGGATGCGATGCGAAAATGTATCTGTCTAAGGAGGTGGTTGAAGGTGTTTCCCAGTGGTTTGTTGTGCAATTCAGCAATATCCACAATCATGAGCTATTGGAAGATGACCAAGTGCGTCTTCTTCCGGCTTATCGAAAGATTCACGAGGCCGATCAAGAGCGCATACTATTGCTTTCTAAAGCAGGGTTTCCAATACATCGGATAGTGAAGATGCTAGAGCTGGAAAAGGGGATTCAAGGTGGGCAATTGCCCTATTTGGAGAGGGATGTGAGGAACTTTGTTCAAAACCGTAAGAAGGTTGTTCAAGAGAACGAGGCATTGCTCAGTGAGAAGAGAGAAAACGATCTATCAGAACTTCTTGAGGCATGCAAAGCCATGAAAGAAGTTGATGTTGACTTTGTTTATGATTTTACAGTGGATGAGAATGATAAAGTTGAAAATGTAGCTTGGTCATATGGTGACTCTGTTAATGCAAATGCTATGTTTGGGGATGTAGTTTATTTCGACACGACATATCGATCAATCACTTATGGATTGCTCTTTGGAGTGTGGTTTGGTATTGATAGCTGTGGCAGAACCATCTTTTTCGGTTCTGTTTTGTTGCAGGATGAAACTCCTCAGTCCTTCTCATGGGCATTGCAGACTTTTGTCCGATTCATGAACGGAAGATGTCCACAAACAATTCTAACTGATCTTGACCCCGGCCTTAAAGATGCCATTAGAAGCGAATATCCAGGAACTAAACATGTCATTCCACCATGGAATATTCTATACAAGGTACCAAGTTGGTTTTCTCTTCATGTTGGGCCACGCTATGCAGAATTTAAATCCATGTTTGATGCATTAATTCAAATTGAGAATACCGAGGAGTTTGAACTACAGTGGAGAGACATGATTTCTGTGTTTGGATTTGGTTCAGATAAACACATTGGTTTACTGTATTCTGTTCGAGCATCCTGGGCACAATCCTATGTGAGAGGTTACTTTCTAGCTCGAATGTCTACAATAGCTTACTCAAAATCAATAGATGCTTTTCTGAAAGGGATCTTCGCTGCACAAACATGTTTGCGTAGCTTTTTCGAGCAGATTGGCATTTCTGCGAACATCCAACATCAAGCGCATCAGGAGACTCACTATATGCATCTGAAAACTTGCATACCTGTTGAAGAGCATGCACGGAGTATCCTCACGCCTTTTGCTTTTAATGCTTTGCAGCAAGAGTTATTGCTGGCCATGCAATATGCTGCATCTGATATGGCCAATGGATCATATATTGTGCGGCATTTCAAAAGTATGGATGGAGAACGGCTTGTAATATGGTTGGCCGAAGACGAACAAATTCACTGCTCTTGCAAGGAATTTGAATCCTCTGGGATATTATGCAGACATGCTCTTCGTGTGTTCATCTTAAAGAATTACTTTCAGCTGCCTGACAAATACTATTTAAGTAGATGGAGACGGGAATGTACTTTACTGATTGATGATGATCACAACAATCAAATTACTGATGGGGAGTGGTTTCAAGAGTACCAGTCCCTAGCCGAAACTTTATTTTCAGAATCCTCGATTACAAAGGAACGATCTGACTATGCTCGAAGTGAACTGACAAAAGAACTTACCAGGATTCTCAATGAGGTCAGAAATCTGCCGGACACCGATGGAGTCCTAATGAACATGACTGTATCGCCGACCAGTTAG 2076 0.4176 MTSIPSKNLWIRRQQCPCGDWKCYITYEGDSDEGSRAEELVKAEKASSGAMITPYVGMVFKSDDEAFEYYGNFARKNGFSVRKERSRVSPQLGIYKRDFVCYRSGFAPVKRKANGEQHRDRKSVRCGCDAKMYLSKEVVEGVSQWFVVQFSNIHNHELLEDDQVRLLPAYRKIHEADQERILLLSKAGFPIHRIVKMLELEKGIQGGQLPYLERDVRNFVQNRKKVVQENEALLSEKRENDLSELLEACKAMKEVDVDFVYDFTVDENDKVENVAWSYGDSVNANAMFGDVVYFDTTYRSITYGLLFGVWFGIDSCGRTIFFGSVLLQDETPQSFSWALQTFVRFMNGRCPQTILTDLDPGLKDAIRSEYPGTKHVIPPWNILYKVPSWFSLHVGPRYAEFKSMFDALIQIENTEEFELQWRDMISVFGFGSDKHIGLLYSVRASWAQSYVRGYFLARMSTIAYSKSIDAFLKGIFAAQTCLRSFFEQIGISANIQHQAHQETHYMHLKTCIPVEEHARSILTPFAFNALQQELLLAMQYAASDMANGSYIVRHFKSMDGERLVIWLAEDEQIHCSCKEFESSGILCRHALRVFILKNYFQLPDKYYLSRWRRECTLLIDDDHNNQITDGEWFQEYQSLAETLFSESSITKERSDYARSELTKELTRILNEVRNLPDTDGVLMNMTVSPTS 691
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu04g00513 691 Pfam MULE transposase domain 291 382 IPR018289 -
Adu04g00513 691 Pfam SWIM zinc finger 570 597 IPR007527 GO:0008270
Adu04g00513 691 Pfam FAR1 DNA-binding domain 68 159 IPR004330 -
Adu04g00513 691 ProSiteProfiles Zinc finger SWIM-type profile. 563 598 IPR007527 GO:0008270
Adu04g00513 691 PANTHER FAR1-RELATED SEQUENCE 10 ISOFORM 1 27 681 - -
Adu04g00513 691 SMART 26again6 573 600 IPR006564 GO:0008270
Adu04g00513 691 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 27 681 IPR031052 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu04g00513 Adu-Chr4 6311066 6313949 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Adu04g00513 MULE 1.2e-14 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu04g00513 - - aprc:113874854 1247.26
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu04g00513 04 6311066 6313949 Adu04g00513 04 6311066 6313949 ECH