Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu04g00500 ATGCAAACCTCCCAGAAACACTCAACCTCAGCTGGTATTCACATATACCACCAGCCAGTGCAAGGCATTGATCCTTACAATCATTACCAAATACTACAAAGCAATTCATGCCATGATATCCATGACAGTAGCAGCCAGGGGACCAATGTGTCGTTTGAAGCCTCGAAGGAGCAATACTATACCCTTGATTCATCCCCAGCAACCAATGGTCTCATAGGTTGTGATTCACCTTCCTGTGCTAGTGTATCATCCAGTAGGAGCCCTTTATCTCCACAGAATTCTCAGTCATACTATTCAGATCAGCACCAATCTTCTGACAACAACTATGGATCGCCAATAAGCGGTTACTCAAGTGCTGAAGATAGCTATGAATTGAAGAACAAGCTAAGAGAATTGGAGATTACATTATTGGGGCCAGAACCAGATATTGTTGATAGTTGTCACTGCTGCTTCAAGAGTGTTCACCAAGGAGCATCTCCAACGTCGAAGTACAATTGGGTTCAGATTGCTGAGATGATTCCAAAGTTGGACTTGAGAGACGTCCTCATTCTTTGTGCACAATCTGTGGCTGATGATGACATTCAAACAGCACTAGGGTGGATGGATAATGTGTTGGTGAAGATGGTATCTGTTGCTGGGGATCCGATACAGCGACTAGGTGCATACATGTTGGAAGGTCTTAGAGCAAGGTTTGAATCATCAGGGAGCTTAATTTACAAGGCATTGAAGTGTGAACAACCAACAAGCAAGGATCTAATGACTTATATGCATGTCTTGTACCAGATTTGCCCGTATTGGAAATTTGCTTACATATCTGCAAATGTTGTCATTGGAGAAGCAATGCAGAATGAAGCAAGGATTCACATAATTGACTTCCAAATTGCACAAGGCACACAGTGGTTCTTGCTCATGCAGGCTCTCGCTCGTAGGCCGGGTGGACCGCCATTCATCCGTGTCACTGGTATTGATGATTCCCAATCAAATCATGCCAGAGGTGGAGGACTTCACATTGTGGGAAAAAAGCTCTCAGAATATGCTAATTCTCTTGGGGTGCCCTTTGAGTTCCACAGTGCTGCAATGTGTGGATCAGAGGTTGAGCTAGAGAACCTTGTGATTCGGCCCGGCGAAGCTCTTGCTGTGAACTTCCCTTTTGTTCTGCACCACATGCCGGATGAGAGCGTAACCACTGAGAATCACAGGGACAGGCTATTGAGGTTGGTGAAGAGCTTGTCACCAAAGGTTGTTACCCTTGTTGAGCAAGAATCCAACACCAACACCTCACCTTTTTTCCAAAGGTTTGTTGAGACCCTTAATTACTACACTGCCATGTTCGAATCCATCGATGTGGCTCGTCCCAGGGACGATAAGCAGAGAATCAGCGCAGAACAGCACTGCGTGGCCCGCGACATTGTCAACATGATAGCTTGTGAGGGCCCTGAGAGGGTGGAAAGGCATGAGCTTCTAGGAAAATGGAGGTCAAGATTTTCCATGGCTGGTTTTTCACCTTGCCCTATGAGTTCTTCAGCTATGGCTGCAGTTAGAAGTCTCTTGAACGAGTTCAATGAGAATTATAGGGTTGAACAAAGAGATGGTGCTTTATACCTAGGATGGAAGAATAGAGCTATGGCCACTTCTTCTGCATGGACATGTTACTGA 1656 0.4535 MQTSQKHSTSAGIHIYHQPVQGIDPYNHYQILQSNSCHDIHDSSSQGTNVSFEASKEQYYTLDSSPATNGLIGCDSPSCASVSSSRSPLSPQNSQSYYSDQHQSSDNNYGSPISGYSSAEDSYELKNKLRELEITLLGPEPDIVDSCHCCFKSVHQGASPTSKYNWVQIAEMIPKLDLRDVLILCAQSVADDDIQTALGWMDNVLVKMVSVAGDPIQRLGAYMLEGLRARFESSGSLIYKALKCEQPTSKDLMTYMHVLYQICPYWKFAYISANVVIGEAMQNEARIHIIDFQIAQGTQWFLLMQALARRPGGPPFIRVTGIDDSQSNHARGGGLHIVGKKLSEYANSLGVPFEFHSAAMCGSEVELENLVIRPGEALAVNFPFVLHHMPDESVTTENHRDRLLRLVKSLSPKVVTLVEQESNTNTSPFFQRFVETLNYYTAMFESIDVARPRDDKQRISAEQHCVARDIVNMIACEGPERVERHELLGKWRSRFSMAGFSPCPMSSSAMAAVRSLLNEFNENYRVEQRDGALYLGWKNRAMATSSAWTCY 551
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu04g00500 551 ProSiteProfiles GRAS family profile. 169 549 IPR005202 -
Adu04g00500 551 Pfam GRAS domain family 178 549 IPR005202 -
Adu04g00500 551 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 20 549 IPR005202 -
Adu04g00500 551 MobiDBLite consensus disorder prediction 83 113 - -
Adu04g00500 551 PANTHER GRAS FAMILY TRANSCRIPTION FACTOR 20 549 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu04g00500 Adu-Chr4 6162023 6163678 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu04g00500 1 548 GRAS Transcription Factor Family AT4G17230 58.439 0.0 635
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Adu04g00500 GRAS 3.4e-127 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu04g00500 - - gmx:100819190 922.154
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu04g00500 04 6162023 6163678 Adu04g00500 04 6162023 6163678 ECH
Adu01g02859 01 98937343 98941847 Adu04g00500 04 6162023 6163678 PCT