Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu04g00484 ATGCACTACAATGTCGAGGTGAGTCCCCAATCGCCGCTGCAACTAGGCCATCCACCGAGGAGGATATCAAAGACTGAACTGTCATTGATACGTGACAAGTTCCTTGACCATCCGAAGGTGCCGCCAGGGATGACCACCTATGACGGCCAGAAGAGCATTTTTAGCATGGTTAATTTTCCGGAAGCTCTTGTGGTGGAAGTATCCAAGGGAGAGAACAAGAAACCCACAGGATTCACCGTGACGTTGACTCTAGTAAAAATCCTTGAAATGAGTAGGTTGGATGATTACATCCGAGGCAGGGCATTGTCAATCCCCAGGAGAATTCAACAAAATGTTCAGGTCACCCATCAGAAGACCAAACAGAAGGGGAACCCCACCGGGAAGCTTAGCCTTGCTGGCTACTTCCACGATAAGTATCAGATTGATATGAAGAACAAGGATTTCCCTGCACTTGTTTTTGGAGGTAACAGGACCAGATATGTGCCAATGGAACTTTGTGACTTGGTTGAGGGTCAGATGCATCCCAGAAAGCATTTGAGCATGGATGCTGCGAGGAATTTGAAAAATTTGTGCCTGCCTTCATCGACAGTGAGGCAAGCTGCAATACTGGAGATGGTGAATTCAAGCTGTGGACCCTGTGGGTAG 645 0.4775 MHYNVEVSPQSPLQLGHPPRRISKTELSLIRDKFLDHPKVPPGMTTYDGQKSIFSMVNFPEALVVEVSKGENKKPTGFTVTLTLVKILEMSRLDDYIRGRALSIPRRIQQNVQVTHQKTKQKGNPTGKLSLAGYFHDKYQIDMKNKDFPALVFGGNRTRYVPMELCDLVEGQMHPRKHLSMDAARNLKNLCLPSSTVRQAAILEMVNSSCGPCG 214
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu04g00484 214 Pfam PAZ domain 127 182 IPR003100 GO:0005515
Adu04g00484 214 MobiDBLite consensus disorder prediction 1 20 - -
Adu04g00484 214 ProSiteProfiles PAZ domain profile. 127 170 IPR003100 GO:0005515
Adu04g00484 214 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2C 123 214 - -
Adu04g00484 214 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2C 1 116 - -
Adu04g00484 214 Gene3D paz domain 97 173 - -
Adu04g00484 214 CDD PAZ_argonaute_like 121 169 - -
Adu04g00484 214 Pfam N-terminal domain of argonaute 2 101 IPR032474 -
Adu04g00484 214 PANTHER TRANSLATION INITIATION FACTOR 2C, PUTATIVE-RELATED 123 214 - -
Adu04g00484 214 PANTHER TRANSLATION INITIATION FACTOR 2C, PUTATIVE-RELATED 1 116 - -
Adu04g00484 214 SUPERFAMILY PAZ domain 101 207 IPR036085 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu04g00484 Adu-Chr4 5768421 5769334 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu04g00484 130 177 Eukaryotic Initiation Factors Gene Family AT1G48410 38.776 5.27e-06 44.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu04g00484 K11593 - gmx:100805250 105.145