Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu04g00443 ATGAGTCAACTCGGCGATATTCTTCAGACGGAGCCAAGGACGATTCTCGGATTGTTGACGGAGCAAATGGACGCCGCCGCCGATGGACCGCCACGCACCAGGACCAGGCGCACCTTCAAGGACCGTTTAGGATTCATCGGCATCGGCTGTTGCGGTGCCACGTGGCGATTCCGTTCTGAGTCCATAACGGTCAGGCACGAAGACCAAGAACAACAGCAACAACCACAGCAACAGCATCAACAGCACCAACCGCTTCTTCTTGAAACGAATCAGGCTCGAGATCCGAACCGTTTTGGACCTGACTGCGTGTCTCCGACTCCTGCCAGTTCCGGTATGAACCTTGCGGCGGCGTTAGCGGCTGAGCGGCAGCTCCGGGGGACGCCGCAGGAGGCGGAGGGAGGTGAGAGAAGAGGTGCGTGGAGGGTGTCGCTGATGAGGCTGCTAGAGGAGACCGACGGCGGCGATGCAGAGGTTAGTTCGGCGGCGAAGACATCGGATGAAGATAAGATAAGTGGTAGTGGTGGTGGTGGTGTGGGAAATGATTGGGTGTGCTGCGTGTGCATGGGGAGGAAGAAAGGCGCGGCGTTCATACCATGTGGTCACACTTTTTGCAGGGTTTGTTCAAGGGAGCTGTGGCTCAACCGAGGCTCTTGTCCCCTTTGCAATCGTTCCATTCTCGAGATTCTCGACATTTTCTGA 699 0.5694 MSQLGDILQTEPRTILGLLTEQMDAAADGPPRTRTRRTFKDRLGFIGIGCCGATWRFRSESITVRHEDQEQQQQPQQQHQQHQPLLLETNQARDPNRFGPDCVSPTPASSGMNLAAALAAERQLRGTPQEAEGGERRGAWRVSLMRLLEETDGGDAEVSSAAKTSDEDKISGSGGGGVGNDWVCCVCMGRKKGAAFIPCGHTFCRVCSRELWLNRGSCPLCNRSILEILDIF 232
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu04g00443 232 MobiDBLite consensus disorder prediction 152 174 - -
Adu04g00443 232 MobiDBLite consensus disorder prediction 68 83 - -
Adu04g00443 232 SUPERFAMILY RING/U-box 180 229 - -
Adu04g00443 232 PANTHER OS01G0917900 PROTEIN 13 232 - -
Adu04g00443 232 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 178 231 IPR013083 -
Adu04g00443 232 CDD RING-HC 184 221 - -
Adu04g00443 232 Pfam Zinc finger, C3HC4 type (RING finger) 183 226 - -
Adu04g00443 232 SMART ring_2 184 221 IPR001841 -
Adu04g00443 232 PANTHER RING/U-BOX SUPERFAMILY PROTEIN 13 232 - -
Adu04g00443 232 MobiDBLite consensus disorder prediction 64 83 - -
Adu04g00443 232 ProSiteProfiles Zinc finger RING-type profile. 184 222 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu04g00443 Adu-Chr4 5266008 5266706 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu04g00443 15 232 C3H Transcription Factor Family AT4G22250 49.776 9.68e-58 180
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu04g00443 - - aip:107638663 421.394
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu04g00443 04 5266008 5266706 Adu04g00443 04 5266008 5266706 ECH
Adu01g02831 01 98537197 98538005 Adu04g00443 04 5266008 5266706 PCT